User contributions for Marina

19 February 2015

• 11:1111:11, 19 February 2015 diff hist +60‎ Protocols:rRNAdust ‎No edit summary current

16 February 2015

• 10:1810:18, 16 February 2015 diff hist +324‎ Protocols:HeliScopeCAGE read alignment ‎No edit summary current

5 September 2012

• 18:2418:24, 5 September 2012 diff hist +55‎ Protocols:HeliScopeCAGE read alignment ‎No edit summary
• 18:2318:23, 5 September 2012 diff hist 0‎ N File:Delve User Manual.pdf ‎No edit summary current
• 18:2118:21, 5 September 2012 diff hist +1,214‎ Protocols:HeliScopeCAGE read alignment ‎No edit summary

3 September 2012

• 16:3016:30, 3 September 2012 diff hist +12‎ Protocols:RNAseq ‎No edit summary current
• 16:2916:29, 3 September 2012 diff hist 0‎ N File:Note2 309pl1210.pdf ‎No edit summary current
• 16:2916:29, 3 September 2012 diff hist 0‎ N File:Note1 2008729133616244.pdf ‎No edit summary current
• 16:2916:29, 3 September 2012 diff hist +3,599‎ N Protocols:RNAseq ‎ Created page with "Sequencing libraries was constructed starting from 2 μg of total RNA. rRNA removal step is executed by (Dynabeads Oligo(dT)25 treatment or Ribo-Zero treatment) [1]. If rRNA r..."
• 13:5513:55, 3 September 2012 diff hist +1‎ Protocols ‎ →‎Computational analysis current
• 13:5413:54, 3 September 2012 diff hist −20‎ Protocols ‎ →‎Computational analysis
• 13:5313:53, 3 September 2012 diff hist −43‎ OP-HELISCOPE-sequencing-v1.0 ‎No edit summary current
• 13:5213:52, 3 September 2012 diff hist −113‎ OP-HELISCOPE-sequencing-v1.0 ‎No edit summary
• 13:5013:50, 3 September 2012 diff hist 0‎ N File:LB-017 01, Low-Volume Sample Loading Protocol.pdf ‎No edit summary current
• 13:5013:50, 3 September 2012 diff hist 0‎ N File:LB-016 01, Sample Loader Manual.pdf ‎No edit summary current
• 13:4913:49, 3 September 2012 diff hist 0‎ N File:Helicos ChIP Seq Protocol.pdf ‎No edit summary current
• 13:4313:43, 3 September 2012 diff hist +8‎ OP-HiSeq2000-sequencing-cBot-v3.0 ‎No edit summary current
• 13:4213:42, 3 September 2012 diff hist +8‎ OP-HiSeq2000-sequencing-cBot-v2.5 ‎No edit summary current
• 13:4113:41, 3 September 2012 diff hist +4‎ OP-SOLEXA-shortRNA-TruSeq-v2.0 ‎No edit summary current
• 13:3813:38, 3 September 2012 diff hist 0‎ N File:TruSeq SmallRNA SamplePrep Guide 15004197 C.pdf ‎No edit summary current
• 13:3813:38, 3 September 2012 diff hist 0‎ N File:HiSeq2000 UserGuide 15011190 D.pdf ‎No edit summary current
• 13:3713:37, 3 September 2012 diff hist 0‎ N File:CBot UserGuide 15006165 F.PDF ‎No edit summary current
• 13:3713:37, 3 September 2012 diff hist 0‎ N File:CBot UserGuide 15006165 C.pdf ‎No edit summary current
• 13:3613:36, 3 September 2012 diff hist 0‎ N File:Cms 059303.pdf ‎No edit summary current
• 13:3513:35, 3 September 2012 diff hist +28‎ Protocols:RNA extraction ‎No edit summary current
• 13:3313:33, 3 September 2012 diff hist +1‎ Protocols:RNA extraction ‎No edit summary
• 13:3113:31, 3 September 2012 diff hist 0‎ N File:RNeasy MinElute Cleanup Handbook.pdf ‎No edit summary current
• 13:3113:31, 3 September 2012 diff hist +121‎ Protocols:RNA extraction ‎No edit summary
• 13:2413:24, 3 September 2012 diff hist 0‎ N File:Trizol isopropanol ver1.pdf ‎No edit summary current
• 13:2413:24, 3 September 2012 diff hist 0‎ N File:Trizol ethanol ver1.pdf ‎No edit summary current
• 13:2313:23, 3 September 2012 diff hist 0‎ N File:Totally RNA ver1.pdf ‎No edit summary current
• 13:0013:00, 3 September 2012 diff hist +17‎ Protocols:RNA extraction ‎No edit summary
• 12:5412:54, 3 September 2012 diff hist 0‎ N File:MiRNEasy ver1.pdf ‎No edit summary current
• 11:4711:47, 3 September 2012 diff hist +133‎ Protocols:SmallRNAseq ‎No edit summary current
• 11:3811:38, 3 September 2012 diff hist −1‎ Protocols ‎ →‎Computational analysis
• 11:3811:38, 3 September 2012 diff hist −4‎ Protocols ‎ →‎Computational analysis
• 11:3811:38, 3 September 2012 diff hist +235‎ Protocols ‎ →‎Computational analysis
• 11:3211:32, 3 September 2012 diff hist +3,341‎ N OP-HiSeq2000-sequencing-cBot-v3.0 ‎ Created page with "Step 1. Prepare Sample DNA for Cluster Generation Combine the template DNA [template_DNA_concentration][1] nM and 0.1 N NaOH. Vortex briefly to mix the template solution. Cen..."
• 11:3011:30, 3 September 2012 diff hist +38‎ Protocols:SmallRNAseq ‎No edit summary
• 11:1511:15, 3 September 2012 diff hist +2‎ OP-SOLEXA-shortRNA-TruSeq-v2.0 ‎No edit summary
• 11:1411:14, 3 September 2012 diff hist +1,832‎ N OP-SOLEXA-shortRNA-TruSeq-v2.0 ‎ Created page with "Library constructed with manufacture's protocol [1] with using 'TruSeq Small RNA Sample Prep Kit' (Catalog #: RS-200-0012, RS-200-0024, RS-200-0036, RS-200-0048). This protoco..."
• 11:1111:11, 3 September 2012 diff hist +2,790‎ N OP-HiSeq2000-sequencing-cBot-v2.5 ‎ Created page with "Step 1. Prepare Sample DNA for Cluster Generation Denature the template DNA with 2 N NaOH to a final DNA concentration [1] and final NaOH concentration of 0.1 N [2]. Incubate..."
• 11:0911:09, 3 September 2012 diff hist +80‎ N Protocols:SmallRNAseq ‎ Created page with "* OP-SOLEXA-shortRNA-TruSeq-v2.0 * OP-HiSeq2000-sequencing-cBot-v2.5 * *"
• 10:5110:51, 3 September 2012 diff hist +52‎ Protocols:RNA extraction ‎No edit summary

31 August 2012

• 13:5913:59, 31 August 2012 diff hist −135‎ Protocols:Motif Activity Response Analysis(MARA) ‎No edit summary current
• 13:5813:58, 31 August 2012 diff hist −3,472‎ Protocols:Motif Activity Response Analysis(MARA) ‎No edit summary
• 13:4813:48, 31 August 2012 diff hist +7,506‎ N Protocols:Motif Activity Response Analysis(MARA) ‎ Created page with "Calculating motif activities in 7 easy steps ============================================ Last updated: 2012.03.29 OSC Table input file requirements -----------------------..."
• 13:0313:03, 31 August 2012 diff hist +3,162‎ N OP-Illumina-sequencing-PairedEnd-v3.0 ‎ Created page with "Protocol: OP-SOLEXA-sequencing-PairedEnd-v3.0 Author: Kaida, Kaoru Created: Sep 17th, 2010 Update: Jul 6th, 2011 Parameters: machine, run, lane, DNA_concentrations, softw..." current
• 13:0213:02, 31 August 2012 diff hist +4,121‎ N OP-SOLEXA-nanoCAGE-Direct-v1.4 ‎ Created page with "Protocol: OP-SOLEXA-nanoCAGE-Direct-v1.4-step1 Author: Salimullah, Md. Created: September 2, 2009 Update: July 8, 2010 Parameters: RNA-mass, RNA-volume, reverse-transcrip..." current
• 13:0213:02, 31 August 2012 diff hist +8‎ Protocols:nanoCAGEscan ‎No edit summary current