Personal tools

MacroAPE 1083:Motif GGNATC

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: motif_GGNATC

Motif matrix
POACGT
0100143680
0200143680
033592359235923592
0414368000
0500014368
0601436800

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

NFKB1#MA0105.120.00302411.4394716GGAATCGGGGAATCCCC-
che-1#MA0260.100.01289256.1368216GGAATCGGTTTC-
Spz1#MA0111.120.01779168.4688216GGAATCAGGGTAACAGC+
so#MA0246.1-10.0180418.5875215GGAATCGTATCA-
Gata1#MA0035.1-10.02026569.646415GGAATCCCATCC-