MacroAPE 1083:Motif GGCNCA
From FANTOM5_SSTAR
Full Name: motif_GGCNCA
| Motif matrix | |||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
|---|---|---|---|---|---|---|---|---|
| AP1#MA0099.2 | 1 | 0.00682079 | 3.2467 | 1 | 6 | GGCTCA | TGACTCA | + |
| usp#MA0016.1 | 1 | 0.00872773 | 4.1544 | 1 | 6 | GGCTCA | GGGGTCACGG | + |
| CRZ1#MA0285.1 | 2 | 0.0103755 | 4.93875 | 1 | 6 | GGCTCA | GTGGCTTAG | - |
| MAC1#MA0326.1 | 2 | 0.0109267 | 5.20113 | 1 | 6 | GGCTCA | TTTGCTCA | + |
| Fos#MA0099.1 | 1 | 0.0131054 | 6.23817 | 1 | 6 | GGCTCA | TGACTCAC | - |
| Six4#MA0204.1 | 0 | 0.0202619 | 9.64467 | 1 | 6 | GGCTCA | GTATCA | - |
