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MacroAPE 1083:Motif GGAGCN

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Full Name: motif_GGAGCN

Motif matrix
POACGT
010016360
020016360
031636000
040016360
050163600
060001636

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

PDR8#MA0354.120.006041582.8757916GGAGCTGCGGAGAT+
REST#MA0138.200.006259452.979516GGAGCTGGCGCTGTCCATGGTGCTGAA-
YLR278C#MA0430.120.006987583.3260916GGAGCTCCGGAGTT+
HAP1#MA0312.110.007633123.6333716GGAGCTCGGAGATA+
GSM1#MA0308.180.008017763.8164516GGAGCTTATACTCCGGAGTTTTTTAAT-
YNR063W#MA0432.120.009018144.2926316GGAGCTTCGGAGAT+
SNT2#MA0384.110.009742034.6372116GGAGCTCGGCGCTACCA-
NHLH1#MA0048.120.01337546.3666816GGAGCTACGCAGCTGCGC-
OAF1#MA0348.120.01471367.0036716GGAGCTTCGGAGATA+
YJL103C#MA0427.150.01646697.8382416GGAGCTTCTCCGGAGCT-
STB5#MA0392.110.01671597.9567516GGAGCTCGGTGTTA+
REST#MA0138.2110.01974079.3965716GGAGCTGCGCTGTCCATGGTGCTGA+
YDR520C#MA0422.120.02012829.5810216GGAGCTCCGGAGATAA+