MacroAPE 1083:5-GCGATTCAAA

Full Name: 5-GCGATTCAAA,CNhs11280,BestGuess:POU5F1.p2.SwissRegulon.nucfreq(0.660812030307913),T:491.0(34.75%),B:10290.7(21.81%),P:1e-28

Motif matrix
PO A C G T 1 40.262 45.663 364.813 40.262 2 56.465 340.754 46.645 47.136 3 62.357 51.555 329.952 47.136 4 323.078 59.902 63.339 44.681 5 56.465 52.046 45.663 336.826 6 50.082 39.28 44.681 356.957 7 45.663 324.06 59.902 61.375 8 345.664 46.645 50.573 48.118 9 372.669 45.172 37.807 35.352 10 342.227 48.609 47.136 53.028

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon

TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya

Target_ID	Optimal_offset	p-value	E-value	q-value	Overlap	Query consensus	Target consensus	Orientation
ARR1#MA0274.1	-3	0.00584494	2.78219	1	7	GCGATTCAAA	ATTCAAGT	-
Fos#MA0099.1	0	0.013289	6.32558	1	8	GCGATTCAAA	GTGAGTCA	+
Sox2#MA0143.1	5	0.0150539	7.16564	1	10	GCGATTCAAA	CCTTTGTTATGCAAA	+