MacroAPE 1083:4-NTGTTTTTTTKTC

Full Name: 4-NTGTTTTTTTKTC,CNhs13238,BestGuess:Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq/Homer(0.720601838754395),T:1131.0(43.60%),B:14362.2(32.67%),P:1e-30

Motif matrix

PO A C G T 1 305.37 280.488 249.951 295.191 2 220.545 257.868 191.139 460.317 3 230.724 246.558 481.806 171.912 4 5.655 23.751 5.655 1095.939 5 49.764 5.655 39.585 1035.996 6 40.716 5.655 93.873 990.756 7 1.131 85.956 5.655 1038.258 8 1.131 76.908 173.043 879.918 9 213.759 61.074 158.34 697.827 10 76.908 26.013 18.096 1009.983 11 98.397 135.72 391.326 505.557 12 261.261 95.004 228.462 546.273 13 15.834 1086.891 1.131 27.144

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon

TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya

Target_ID	Optimal_offset	p-value	E-value	q-value	Overlap	Query consensus	Target consensus	Orientation
hb#MA0049.1	-3	3.35157e-05	0.0159535	0.0318315	10	ATGTTTTTTTTTC	TTTTTTATGC	-
NDT80#MA0343.1	2	0.000302287	0.143889	0.143549	13	ATGTTTTTTTTTC	TTGCGTTTTTGTGGCCGGAAA	-
AZF1#MA0277.1	-3	0.00217782	1.03664	0.605295	9	ATGTTTTTTTTTC	TTTCTTTTT	-
Foxd3#MA0041.1	2	0.00254929	1.21346	0.605295	10	ATGTTTTTTTTTC	GAATGTTTGTTT	+
FKH1#MA0296.1	1	0.00357403	1.70124	0.673571	13	ATGTTTTTTTTTC	TCCTCTTTGTTTACAATTCA	-
STAT1#MA0137.1	0	0.00425679	2.02623	0.673571	13	ATGTTTTTTTTTC	CAGTTTCATTTTCC	-
FOXI1#MA0042.1	2	0.00496447	2.36309	0.673571	10	ATGTTTTTTTTTC	GGATGTTTGTTT	+
id1#MA0120.1	-2	0.00682895	3.25058	0.810724	11	ATGTTTTTTTTTC	TTTTCCTTTTCG	+
Evi1#MA0029.1	-1	0.00872093	4.15116	0.920299	12	ATGTTTTTTTTTC	TGTTATCTTATCTT	-
br_Z1#MA0010.1	1	0.0112764	5.36758	0.997635	13	ATGTTTTTTTTTC	GATTTGTCTATTAC	-
HMG-I/Y#MA0045.1	0	0.0162873	7.75274	0.997635	13	ATGTTTTTTTTTC	GTTTTTCCATTTGTTG	-
SFP1#MA0378.1	7	0.0168423	8.01691	0.997635	13	ATGTTTTTTTTTC	CCGTAGAAAATTTTTTTCAAT	-
HCM1#MA0317.1	-3	0.0185912	8.84939	0.997635	8	ATGTTTTTTTTTC	TTGTTTAT	-
br_Z3#MA0012.1	-1	0.0193611	9.21589	0.997635	11	ATGTTTTTTTTTC	CTTTTAGTTTA	-