Personal tools

MacroAPE 1083:3-MASTTCCCCTTW

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: 3-MASTTCCCCTTW,CNhs11673,BestGuess:NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq/Homer(0.739349270844042),T:141.0(4.14%),B:616.2(1.34%),P:1e-29

Motif matrix
POACGT
180.22960.4890.1410.141
2109.4160.1410.14131.302
319.17656.96464.860.141
40.1410.1410.141140.577
50.1410.1410.141140.577
60.14185.4460.14155.272
70.141140.5770.1410.141
80.141140.5770.1410.141
944.69766.8340.14129.328
100.14150.05515.93374.871
1150.760.1410.14189.958
1271.3460.1410.14169.372

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

SPI1#MA0080.2-20.001001340.4766380.8117016AAGTTCCCCTTACTTCCG-
SPI1#MA0080.2-10.003625381.725680.8117017AAGTTCCCCTTAACTTCCT-
MZF1_5-13#MA0057.1-30.004157421.978930.8117019AAGTTCCCCTTATTCCCCCTAC-
id1#MA0120.1-30.004401722.095220.8117019AAGTTCCCCTTATTTTCCTTTTCG+
STAT1#MA0137.100.004548652.165160.81170112AAGTTCCCCTTACAGTTTCATTTTCC-
squamosa#MA0082.1-20.005117062.435720.81170110AAGTTCCCCTTAATTTCCATTTTTGG-
Klf4#MA0039.1-10.006288372.993260.85500110AAGTTCCCCTTACCTTCCTTTA-
RELA#MA0107.120.01046584.981740.9615458AAGTTCCCCTTAGGAAATTCCC-
NF-kappaB#MA0061.120.01168065.559980.9615458AAGTTCCCCTTAGGAAATTCCC-
MZF1_1-4#MA0056.1-40.01337316.365610.9615456AAGTTCCCCTTATCCCCA-
SPIB#MA0081.1-30.01374736.54370.9615457AAGTTCCCCTTATTCCTCT-
USV1#MA0413.100.01544057.349660.96154512AAGTTCCCCTTAAAATTCCCCCTGAATTTGTG+
IRF1#MA0050.1-10.0157767.50940.96154511AAGTTCCCCTTAGGTTTCACTTTC-
Spz1#MA0111.110.01620617.714090.96154510AAGTTCCCCTTAGCTGTTACCCT-
Pax4#MA0068.130.01653547.870840.96154512AAGTTCCCCTTAGAAAAATTTCCCATACTCCACTCCCCCCCC+
znf143#MA0088.100.01717488.175210.96154512AAGTTCCCCTTAGATTTCCCATAATGCCTTGC+
GIS1#MA0306.1-40.02039539.708170.9929968AAGTTCCCCTTAACCCCTAAA+