MacroAPE 1083:2-CCTTTTAA
From FANTOM5_SSTAR
Full Name: 2-CCTTTTAA,CNhs10616,BestGuess:TBP.p2.SwissRegulon.nucfreq(0.686755716817853),T:576.0(32.43%),B:9446.6(20.01%),P:1e-34
| Motif matrix | |||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
|---|---|---|---|---|---|---|---|---|
| RME1#MA0370.1 | 2 | 0.00521366 | 2.4817 | 1 | 8 | CCTTTTAA | TTCCTTTGGA | - |
| Hltf#MA0109.1 | 2 | 0.0064242 | 3.05792 | 1 | 8 | CCTTTTAA | AACCTTATAT | + |
| TBP#MA0108.2 | 5 | 0.0139327 | 6.63195 | 1 | 8 | CCTTTTAA | CCCCGCCTTTTATAC | - |
| TBP#MA0108.2 | 5 | 0.0139327 | 6.63195 | 1 | 8 | CCTTTTAA | CCCCGCCTTTTATAC | - |
| B-H1#MA0168.1 | -1 | 0.0168756 | 8.03278 | 1 | 7 | CCTTTTAA | CAATTAA | - |
| Kr#MA0452.1 | 4 | 0.0203833 | 9.70247 | 1 | 7 | CCTTTTAA | TAACCCTTTTG | - |
