Personal tools

MacroAPE 1083:11-TSACGCSTCAGT

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: 11-TSACGCSTCAGT,CNhs13485,BestGuess:CREB1_f1_HM09(0.648721945847651),T:2933.0(44.14%),B:14777.5(34.97%),P:1e-53

Motif matrix
POACGT
1322.632.9332.9332604.504
22.9331299.3191627.8152.933
32924.2012.9332.9332.933
42.9332924.2012.9332.933
52.9332.9332924.2012.933
6651.1261627.8152.933651.126
7651.1261302.252976.6892.933
8976.6892.933325.5631627.815
92.9332924.2012.9332.933
101953.3782.9332.933973.756
112.9332.9332924.2012.933
122.9332.9332.9332924.201

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

Pax6#MA0069.110.0002056120.09787150.19507412TGACGCCTCAGTTTCACGCATGAGTT+
Pax5#MA0014.130.0008916180.424410.30079712TGACGCCTCAGTCCGCTACGCTTCAGTGCTCT-
CREB1#MA0018.200.0009511440.4527440.3007978TGACGCCTCAGTTGACGTCA+
MET31#MA0333.1-30.001545310.7355670.3271059TGACGCCTCAGTCGCCACACT-
MBP1#MA0329.1-20.002059330.9802410.3271057TGACGCCTCAGTACGCGTA+
hkb#MA0450.100.002068660.9846830.3271059TGACGCCTCAGTTCACGCCCC-
MBP1::SWI6#MA0330.1-20.003001931.428920.3948147TGACGCCTCAGTACGCGTT+
ARG80#MA0271.100.003329151.584680.3948146TGACGCCTCAGTAGACGC+
TGA1A#MA0129.100.007052653.357060.7434627TGACGCCTCAGTTGACGTA-
Arnt::Ahr#MA0006.1-10.008691864.137320.7691376TGACGCCTCAGTCACGCA-
HAC1#MA0310.1-10.009169264.364570.7691378TGACGCCTCAGTCACGTGTC-
bZIP910#MA0096.110.009845534.686470.7691376TGACGCCTCAGTCTGACGT+
RXR::RAR_DR5#MA0159.100.0105395.016550.76913712TGACGCCTCAGTTGACCTCTCCGTGACCT-
MET32#MA0334.1-30.01193075.679040.8085167TGACGCCTCAGTCGCCACA+
CST6#MA0286.110.01588317.560360.8933738TGACGCCTCAGTATGACGTAA+
TYE7#MA0409.100.01735438.260670.9147137TGACGCCTCAGTTCACGTG-