FFCP PHASE2:Mm9::chr12:88019635..88019746,+
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p1@Vash1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Vash1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:22 |
| Association with transcript: | 0bp_to_ENSMUST00000021681, NM_177354, uc007ohx.2_5end |
| EntrezGene: | Vash1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@Vash1 |
|---|
0
25
50
75
100
125
150
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neuron | 1.02e-17 | 33 |
| neuronal stem cell | 1.02e-17 | 33 |
| neuroblast | 1.02e-17 | 33 |
| electrically signaling cell | 1.02e-17 | 33 |
| neural cell | 7.59e-16 | 43 |
| ectodermal cell | 1.21e-15 | 44 |
| neurectodermal cell | 1.21e-15 | 44 |
| CNS neuron (sensu Vertebrata) | 2.50e-12 | 23 |
| neuroblast (sensu Vertebrata) | 2.50e-12 | 23 |
| electrically responsive cell | 6.40e-12 | 39 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| central nervous system | 1.61e-23 | 73 |
| nervous system | 2.03e-23 | 75 |
| ectoderm-derived structure | 1.11e-22 | 95 |
| ectoderm | 1.11e-22 | 95 |
| presumptive ectoderm | 1.11e-22 | 95 |
| neurectoderm | 5.72e-19 | 64 |
| neural plate | 5.72e-19 | 64 |
| presumptive neural plate | 5.72e-19 | 64 |
| structure with developmental contribution from neural crest | 7.12e-19 | 92 |
| ecto-epithelium | 3.07e-16 | 73 |
Showing 1 to 10 of 34 entries
