FFCP PHASE1:Hg19::chrX:591524..591527,+
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| Short description: | p1@SHOX |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_SHOX_5end |
| Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
| Association with transcript: | -14bp_to_ENST00000381575, ENST00000554971, ENST00000558872, ENST00000559808, ENST00000560001_5end |
| EntrezGene: | SHOX |
| HGNC: | 10853 |
| UniProt: | NA |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p1@SHOX |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| locus ceruleus | 2.12e-20 | 2 |
| brainstem nucleus | 2.12e-20 | 2 |
| hindbrain nucleus | 2.12e-20 | 2 |
| pons | 6.16e-14 | 3 |
| placenta | 1.09e-10 | 4 |
| allantois | 1.09e-10 | 4 |
| regional part of metencephalon | 2.49e-10 | 9 |
| metencephalon | 2.49e-10 | 9 |
| future metencephalon | 2.49e-10 | 9 |
| breast | 1.83e-09 | 10 |
Showing 1 to 10 of 16 entries
| Ontology term | p-value | n |
|---|---|---|
| peripheral nervous system neoplasm | 1.23e-14 | 3 |
| chondrosarcoma | 8.62e-12 | 1 |
| extraosseous chondrosarcoma | 8.62e-12 | 1 |
| myxoid chondrosarcoma | 8.62e-12 | 1 |
| extraskeletal myxoid chondrosarcoma | 8.62e-12 | 1 |
| peripheral primitive neuroectodermal tumor | 1.45e-11 | 1 |
| musculoskeletal system disease | 4.87e-09 | 5 |
| myotonic disease | 4.87e-09 | 5 |
| muscle tissue disease | 4.87e-09 | 5 |
| myopathy | 4.87e-09 | 5 |
Showing 1 to 10 of 12 entries
