FFCP PHASE1:Hg19::chr9:126774091..126774098,+
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| Short description: | p4@LHX2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_LHX2_5end |
| Coexpression cluster: | C361_Neural_Astrocyte_Neurons_spinal_Chondrocyte_Fibroblast_sacrococcigeal |
| Association with transcript: | 202bp_to_ENST00000373615, NM_004789, uc004boe.1, uc010mwi.1_5end |
| EntrezGene: | LHX2 |
| HGNC: | 6594 |
| UniProt: | P50458B3KNJ5 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p4@LHX2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neuronal stem cell | 4.33e-20 | 8 |
| astrocyte of the cerebral cortex | 6.97e-20 | 3 |
| retinal pigment epithelial cell | 3.53e-19 | 3 |
| visual pigment cell | 1.59e-14 | 4 |
| neural cell | 4.42e-14 | 25 |
| neuron | 3.19e-10 | 6 |
| neuroblast | 3.19e-10 | 6 |
| electrically signaling cell | 3.19e-10 | 6 |
| oligodendrocyte | 8.40e-09 | 7 |
| macroglial cell | 8.40e-09 | 7 |
Showing 1 to 10 of 13 entries
| Ontology term | p-value | n |
|---|---|---|
| cerebral cortex | 9.88e-49 | 25 |
| pallium | 9.88e-49 | 25 |
| regional part of telencephalon | 3.79e-43 | 32 |
| cerebral hemisphere | 3.79e-43 | 32 |
| pre-chordal neural plate | 2.18e-42 | 61 |
| brain grey matter | 1.70e-40 | 34 |
| gray matter | 1.70e-40 | 34 |
| telencephalon | 1.70e-40 | 34 |
| regional part of cerebral cortex | 1.32e-34 | 22 |
| regional part of forebrain | 3.33e-33 | 41 |
Showing 1 to 10 of 60 entries
