FFCP PHASE1:Hg19::chr1:156084534..156084545,+
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| Short description: | p4@LMNA |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_LMNA_5end |
| Coexpression cluster: | C1839_Mast_immature_Fibroblast_Mesenchymal_Hair_tenocyte_Keratocytes |
| Association with transcript: | 17bp_to_ENST00000292302_5end |
| EntrezGene: | LMNA |
| HGNC: | 6636 |
| UniProt: | Q5TCJ4 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p4@LMNA |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mesodermal cell | 1.09e-21 | 121 |
| fibroblast | 1.29e-17 | 76 |
| muscle precursor cell | 1.53e-16 | 58 |
| myoblast | 1.53e-16 | 58 |
| multi-potent skeletal muscle stem cell | 1.53e-16 | 58 |
| embryonic cell | 4.86e-16 | 250 |
| muscle cell | 7.62e-16 | 55 |
| smooth muscle cell | 7.71e-14 | 43 |
| smooth muscle myoblast | 7.71e-14 | 43 |
| somatic stem cell | 1.76e-12 | 433 |
Showing 1 to 10 of 16 entries
| Ontology term | p-value | n |
|---|---|---|
| epithelial vesicle | 3.66e-20 | 78 |
| somite | 2.73e-18 | 71 |
| presomitic mesoderm | 2.73e-18 | 71 |
| presumptive segmental plate | 2.73e-18 | 71 |
| dermomyotome | 2.73e-18 | 71 |
| trunk paraxial mesoderm | 2.73e-18 | 71 |
| mesoderm | 8.42e-18 | 315 |
| mesoderm-derived structure | 8.42e-18 | 315 |
| presumptive mesoderm | 8.42e-18 | 315 |
| dense mesenchyme tissue | 1.28e-17 | 73 |
Showing 1 to 10 of 46 entries
