FFCP PHASE1:Hg19::chr19:35739631..35739674,+
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| Short description: | p2@LSR |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_LSR_5end |
| Coexpression cluster: | C1817_Alveolar_smallcell_acantholytic_Hepatocyte_squamous_liver_mesothelioma |
| Association with transcript: | 72bp_to_ENST00000354900, ENST00000360798, ENST00000361790, NM_015925, NM_205834, NM_205835, uc002nyl.2, uc002nym.2, uc002nyn.2, uc002nyo.2, uc010xsr.1_5end |
| EntrezGene: | LSR |
| HGNC: | 29572 |
| UniProt: | E9PHD4A6NDW3Q86X29Q9BT33Q9BWS2 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p2@LSR |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 9.84e-26 | 253 |
| endodermal cell | 1.19e-14 | 58 |
| endo-epithelial cell | 4.38e-13 | 42 |
| kidney tubule cell | 3.77e-07 | 10 |
| nephron tubule epithelial cell | 3.77e-07 | 10 |
| epithelial cell of alimentary canal | 4.16e-07 | 20 |
Showing 1 to 6 of 6 entries
| Ontology term | p-value | n |
|---|---|---|
| endoderm-derived structure | 5.88e-16 | 160 |
| endoderm | 5.88e-16 | 160 |
| presumptive endoderm | 5.88e-16 | 160 |
| trunk region element | 3.78e-13 | 101 |
| subdivision of digestive tract | 1.72e-12 | 118 |
| digestive system | 2.37e-12 | 145 |
| digestive tract | 2.37e-12 | 145 |
| primitive gut | 2.37e-12 | 145 |
| renal system | 4.20e-11 | 48 |
| urinary system structure | 6.01e-11 | 47 |
Showing 1 to 10 of 27 entries
| Ontology term | p-value | n |
|---|---|---|
| carcinoma | 3.25e-21 | 106 |
| cell type cancer | 1.19e-12 | 143 |
| squamous cell carcinoma | 1.71e-08 | 14 |
| adenocarcinoma | 3.02e-07 | 25 |
Showing 1 to 4 of 4 entries
