FFCP PHASE1:Hg19::chr10:33247223..33247234,-
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p3@ITGB1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_ITGB1_5end |
| Coexpression cluster: | C3013_Smooth_Fibroblast_hepatic_mesenchymal_basal_spindle_Mesothelial |
| Association with transcript: | 58bp_to_NM_002211, uc001iwt.3_5end |
| EntrezGene: | ITGB1 |
| HGNC: | 6153 |
| UniProt: | P05556 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@ITGB1 |
|---|
0
10
20
30
40
50
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| muscle precursor cell | 7.36e-14 | 58 |
| myoblast | 7.36e-14 | 58 |
| multi-potent skeletal muscle stem cell | 7.36e-14 | 58 |
| embryonic cell | 1.11e-13 | 250 |
| fibroblast | 5.98e-13 | 76 |
| muscle cell | 1.67e-12 | 55 |
| electrically responsive cell | 9.30e-12 | 61 |
| electrically active cell | 9.30e-12 | 61 |
| smooth muscle cell | 3.19e-10 | 43 |
| smooth muscle myoblast | 3.19e-10 | 43 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| multilaminar epithelium | 8.05e-15 | 83 |
| mesenchyme | 3.79e-14 | 160 |
| entire embryonic mesenchyme | 3.79e-14 | 160 |
| muscle tissue | 7.00e-14 | 64 |
| musculature | 7.00e-14 | 64 |
| musculature of body | 7.00e-14 | 64 |
| skeletal muscle tissue | 8.39e-14 | 62 |
| striated muscle tissue | 8.39e-14 | 62 |
| myotome | 8.39e-14 | 62 |
| somite | 3.30e-13 | 71 |
Showing 1 to 10 of 42 entries
