EntrezGene:231252

Symbol:	Chrna9
Description:	cholinergic receptor, nicotinic, alpha polypeptide 9
Synonyms:	2410015I05Rik, Acra9, EG666827, Gm8311
Species:	Mouse (Mus musculus)
Xrefs:	ExpandEntrezGene:231252 MGI:1202403 Ensembl:ENSMUSG00000029205 Vega:OTTMUSG00000022200
Associated motifs:	NA
Transcripton Factor?:	No

TSS regions

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Mm9::chr5:66326133..66326141,+	p5@Chrna9
Mm9::chr5:66326149..66326160,+	p4@Chrna9
Mm9::chr5:66326161..66326245,+	p1@Chrna9
Mm9::chr5:66358187..66358191,+	p6@Chrna9
Mm9::chr5:66358585..66358620,+	p3@Chrna9
Mm9::chr5:66358623..66358640,+	p2@Chrna9
Mm9::chr5:66367089..66367105,+	p7@Chrna9
Mm9::chr5:66367121..66367132,+	p8@Chrna9
Mm9::chr5:66367217..66367228,+	p9@Chrna9
TSS peak ID	Short_description

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TSS expression

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Sample	p1@Chrna9	p2@Chrna9	p3@Chrna9	p4@Chrna9	p5@Chrna9

Sample	p1@Chrna9	p2@Chrna9	p3@Chrna9	p4@Chrna9	p5@Chrna9
thymus, neonate N30.CNhs11132.1393-42G2	276.41	0.12	0.23	12.16	8.88
thymus, adult.CNhs10471.38-12B5	192.13	0.00	0.00	9.16	4.11
thymus, neonate N25.CNhs11125.1362-25G7	191.75	0.38	0.19	7.70	6.64
thymus, neonate N20.CNhs11186.820-7A2	183.12	0.19	0.29	9.26	7.89
thymus, neonate N10.CNhs11194.748-24E4	177.35	0.00	0.20	7.86	5.85
thymus, neonate N07.CNhs11211.713-19D3	162.32	0.08	0.00	7.39	5.49
thymus, neonate N06.CNhs11197.681-26C4	158.52	0.30	0.30	7.27	6.26
thymus, embryo E18.CNhs10595.1273-19G4	139.08	0.79	0.20	5.17	4.77
thymus, neonate N03.CNhs11137.2104-43C7	125.98	0.30	0.30	5.76	6.35
thymus, neonate N02.CNhs11181.1541-43F8	109.86	0.00	0.36	6.01	2.64
thymus, embryo E17.CNhs10581.478-18C1	67.67	0.00	0.18	3.58	3.22
thymus, embryo E16.CNhs11002.456-26C5	31.18	0.65	0.52	2.34	1.30
thymus, embryo E15.CNhs11005.430-45I2	12.84	0.31	0.21	0.31	0.10
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3	7.40	0.09	0.00	0.26	0.43
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6	4.91	0.00	0.00	0.11	0.23
lung, embryo E17.CNhs10605.480-44A6	3.35	0.00	0.00	0.67	0.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7	2.67	0.56	0.14	0.28	0.00
whole body, neonate N00.CNhs10525.657-19C2	2.58	2.79	1.72	0.00	0.43
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5	2.37	2.89	1.58	0.00	0.00
heart, neonate N20.CNhs11127.821-26I6	1.61	0.00	0.00	0.00	0.29
thymus, embryo E14.CNhs11041.402-44I4	1.42	0.00	0.00	0.00	0.20
heart, neonate N00.CNhs11213.639-21E3	1.28	0.00	0.00	0.23	0.12
whole body, embryo E18.CNhs10516.493-3B3	1.17	1.64	5.15	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5	1.01	2.28	1.27	0.00	0.00
whole body, embryo E17.5.CNhs10513.490-9F9	0.96	0.77	1.54	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5	0.95	2.38	1.43	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5	0.94	3.77	2.64	0.00	0.00
heart, neonate N10.CNhs11118.749-24G1	0.82	0.00	0.00	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5	0.82	3.09	1.65	0.00	0.41
lung, neonate N06.CNhs11212.683-20E5	0.79	0.32	0.00	0.00	0.00
lung, neonate N00.CNhs11224.640-42C6	0.78	0.20	0.00	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5	0.77	2.48	1.55	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5	0.75	2.30	2.76	0.00	0.11
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5	0.73	3.11	2.20	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5	0.71	2.13	2.66	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5	0.68	1.78	1.61	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5	0.67	1.33	2.44	0.00	0.00
heart, neonate N25.CNhs11196.1351-25D3	0.66	0.00	0.00	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5	0.64	2.25	3.53	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5	0.59	2.49	2.14	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5	0.59	2.27	1.67	0.10	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5	0.58	2.20	1.74	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5	0.58	2.89	1.54	0.39	0.00
heart, neonate N16.CNhs11209.782-15G1	0.57	0.00	0.00	0.08	0.08
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5	0.56	1.79	1.60	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5	0.56	1.12	0.56	0.00	0.00
heart, neonate N30.CNhs11202.1390-42D2	0.54	0.00	0.00	0.00	0.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9	0.52	0.00	0.00	0.00	0.00
spleen, adult.CNhs10465.25-2G2	0.51	0.00	0.00	0.00	0.00
bone (os femoris), neonate N20.CNhs11195.1350-25C3	0.48	0.48	0.48	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5	0.48	2.86	0.95	0.00	0.00
lung, neonate N07.CNhs11111.715-19A3	0.44	0.00	0.00	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5	0.44	3.09	1.47	0.00	0.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5	0.44	1.60	2.47	0.00	0.15
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6	0.42	0.00	0.00	0.00	0.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4	0.41	0.00	0.00	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5	0.41	2.86	3.27	0.00	0.00
heart, embryo E15.CNhs11017.431-16C8	0.39	0.00	0.00	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5	0.37	2.90	2.25	0.00	0.09
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5	0.34	2.74	1.71	0.00	0.69
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1	0.33	0.00	0.00	0.00	0.00
lung, neonate N20.CNhs11109.822-18A4	0.33	0.82	0.16	0.16	0.00
small intestine, neonate N16.CNhs11114.790-21I1	0.29	0.00	0.00	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5	0.27	1.63	1.90	0.00	0.14
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8	0.26	0.00	0.00	0.00	0.00
accessory axillary lymph node, adult.CNhs10475.1063-29H9	0.26	0.00	0.00	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5	0.25	1.26	1.01	0.00	0.00
heart, embryo E17.CNhs11025.479-18E5	0.23	0.00	0.00	0.00	0.00
whole body, neonate N06.CNhs10515.692-21D1	0.22	2.65	2.43	0.00	0.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2	0.20	0.00	0.00	0.00	0.10
gonad, embryo E13.CNhs11044.1564-45I6	0.20	0.00	0.00	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5	0.19	2.75	2.37	0.06	0.00
whole body, neonate N01.CNhs10576.659-23C6	0.19	3.25	3.44	0.00	0.00
eyeball, embryo E15.CNhs10593.426-16C9	0.18	0.00	0.00	0.00	0.00
whole body, embryo E16.CNhs10514.453-14F2	0.18	0.37	0.00	0.00	0.00
whole body, embryo E13.CNhs10512.372-23H2	0.17	0.00	0.00	0.00	0.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2	0.16	0.00	0.00	0.00	0.00
lung, neonate N10.CNhs11219.750-23E6	0.16	0.16	0.16	0.00	0.00
skin, neonate N00.CNhs11124.650-25G4	0.16	0.32	0.65	0.00	0.00
aorta, adult.CNhs10498.46-23H1	0.14	0.00	0.00	0.00	0.00
lung, neonate N30.CNhs11133.1394-42H2	0.14	0.00	0.00	0.00	0.00
stomach, neonate N07.CNhs11210.718-18A9	0.08	0.00	0.00	0.00	0.00
Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7	0.00	0.00	0.00	0.00	0.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5	0.00	0.00	0.00	0.00	0.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6	0.00	0.00	0.00	0.00	0.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I3	0.00	0.00	0.00	0.00	0.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I4	0.00	0.00	0.00	0.00	0.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7	0.00	0.00	0.00	0.00	0.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8	0.00	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7	0.00	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2	0.00	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6	0.00	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1	0.00	0.00	0.00	0.08	0.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4	0.00	0.00	0.00	0.00	0.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3	0.00	0.00	0.00	0.00	0.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5	0.00	0.00	0.00	0.00	0.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9	0.00	0.00	0.00	0.00	0.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1	0.00	0.00	0.00	0.00	0.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2	0.00	0.00	0.00	0.00	0.00
GP2+ M cell, pool1.CNhs13228.11845-124H9	0.00	0.00	0.00	0.00	0.00
GP2+ M cell, pool2.CNhs13231.11846-124I1	0.00	0.00	0.00	0.00	0.00
GP2+ M cell, pool3.CNhs13240.11847-124I2	0.00	0.00	0.00	0.00	0.00
Ileum epithelium, pool1.CNhs13199.10252-104B9	0.00	0.00	0.00	0.00	0.00
Ileum epithelium, pool2.CNhs13232.10253-104C1	0.00	0.00	0.00	0.00	0.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8	0.00	0.00	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3	0.00	0.00	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6	0.00	0.00	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9	0.00	0.00	0.00	0.00	0.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5	0.00	0.00	0.00	0.00	0.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6	0.00	0.00	0.00	0.00	0.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7	0.00	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8	0.00	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1	0.00	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3	0.00	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9	0.00	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2	0.00	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4	0.00	0.00	0.00	0.00	0.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8	0.00	0.00	0.00	0.00	0.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9	0.00	0.00	0.00	0.00	0.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3	0.00	0.00	0.00	0.00	0.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7	0.00	0.00	0.00	0.00	0.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2	0.00	0.00	0.00	0.00	0.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8	0.00	0.00	0.00	0.00	0.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3	0.00	0.00	0.00	0.00	0.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C4	0.00	0.00	0.00	0.00	0.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C4	0.00	0.00	0.00	0.00	0.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2	0.00	0.00	0.00	0.00	0.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9	0.00	0.00	0.00	0.00	0.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1	0.00	0.00	0.00	0.00	0.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1	0.00	0.00	0.00	0.00	0.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1	0.00	0.00	0.00	0.00	0.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5	0.00	0.00	0.00	0.00	0.00
Mouse Granule cells, donor1.CNhs12131.11713-123C3	0.00	0.00	0.00	0.00	0.00
Mouse Granule cells, donor2.CNhs12357.11731-123E3	0.00	0.00	0.00	0.00	0.00
Mouse Granule cells, donor3.CNhs12108.11636-122C7	0.00	0.00	0.00	0.00	0.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6	0.00	0.00	0.00	0.00	0.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1	0.00	0.00	0.00	0.00	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7	0.00	0.00	0.00	0.00	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7	0.00	0.00	0.00	0.00	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2	0.00	0.00	0.00	0.00	0.00
Mouse Microglia, donor1.CNhs12629.11718-123C8	0.00	0.00	0.00	0.00	0.00
Mouse Microglia, donor2.CNhs12634.11736-123E8	0.00	0.00	0.00	0.00	0.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5	0.00	0.00	0.00	0.00	0.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5	0.00	0.00	0.00	0.00	0.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9	0.00	0.00	0.00	0.00	0.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1	0.00	0.00	0.00	0.00	0.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5	0.00	0.00	0.00	0.00	0.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2	0.00	0.00	0.00	0.00	0.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2	0.00	0.00	0.00	0.00	0.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6	0.00	0.00	0.00	0.00	0.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3	0.00	0.00	0.00	0.00	0.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3	0.00	0.00	0.00	0.00	0.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7	0.00	0.00	0.00	0.00	0.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4	0.00	0.00	0.00	0.00	0.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4	0.00	0.00	0.00	0.00	0.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8	0.00	0.00	0.00	0.00	0.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4	0.00	0.00	0.00	0.00	0.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5	0.00	0.00	0.00	0.00	0.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6	0.00	0.00	0.00	0.00	0.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6	0.00	0.00	0.00	0.00	0.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6	0.00	0.00	0.00	0.00	0.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1	0.00	0.00	0.00	0.00	0.00
Mouse Schwann, donor1.CNhs12507.11728-123D9	0.00	0.00	0.00	0.00	0.00
Mouse Schwann, donor2.CNhs12573.11746-123F9	0.00	0.00	0.00	0.00	0.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3	0.00	0.00	0.00	0.00	0.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7	0.00	0.00	0.00	0.00	0.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C4	0.00	0.00	0.00	0.00	0.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C8	0.00	0.00	0.00	0.00	0.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F4	0.00	0.00	0.00	0.00	0.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F6	0.00	0.00	0.00	0.00	0.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7	0.00	0.00	0.00	0.00	0.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3	0.00	0.00	0.00	0.00	0.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8	0.00	0.00	0.00	0.00	0.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6	0.00	7.18	9.15	0.00	0.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1	0.00	0.00	0.00	0.00	0.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8	0.00	0.00	0.00	0.00	0.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6	0.00	0.00	0.00	0.00	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1	0.00	0.00	0.00	0.00	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2	0.00	0.00	0.00	0.00	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3	0.00	0.00	0.00	0.00	0.00
adrenal gland, adult.CNhs10508.49-24D7	0.00	0.00	0.00	0.00	0.00
adrenal gland, embryo E14.CNhs11038.406-44C5	0.00	0.00	0.17	0.00	0.00
adrenal gland, embryo E16.CNhs11004.1254-43D6	0.00	0.00	0.00	0.00	0.00
adrenal gland, embryo E17.CNhs11043.1263-45I1	0.00	0.00	0.00	0.00	0.00
adrenal gland, embryo E18.CNhs11026.1262-18F5	0.00	0.15	0.15	0.00	0.00
adrenal gland, neonate N00.CNhs11191.1311-23C1	0.00	0.12	0.12	0.00	0.00
adrenal gland, neonate N25.CNhs11223.1377-27I3	0.00	0.00	0.00	0.00	0.00
amnion, adult pregnant day17.5.CNhs10488.583-22A8	0.00	0.00	0.00	0.00	0.00
bone (os femoris), adult.CNhs10483.56-12G2	0.00	0.00	0.00	0.00	0.00
bone (os femoris), neonate N02.CNhs11227.1985-43F5	0.00	6.79	7.12	0.00	0.00
bone (os femoris), neonate N16.CNhs11225.1525-43A6	0.00	0.88	0.66	0.00	0.00
cecum, adult.CNhs10467.37-13H4	0.00	0.00	0.00	0.00	0.00
cerebellum, adult.CNhs10494.15-8B2	0.00	0.00	0.00	0.00	0.00
cerebellum, neonate N30.CNhs11135.1395-42I2	0.00	0.00	0.00	0.00	0.00
colon, adult.CNhs10468.36-18H7	0.00	0.00	0.00	0.00	0.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7	0.00	0.00	0.00	0.00	0.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1	0.00	0.00	0.00	0.00	0.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4	0.00	0.00	0.00	0.00	0.00
corpora quadrigemina, adult.CNhs10501.16-22A4	0.00	0.00	0.00	0.00	0.00
corpus striatum, adult.CNhs10487.19-21D8	0.00	0.00	0.00	0.00	0.00
corpus striatum, neonate N00.CNhs11226.630-43F1	0.00	0.00	0.00	0.00	0.00
cortex, adult.CNhs10473.12-14D5	0.00	0.00	0.00	0.00	0.00
cortex, neonate N30.CNhs11107.1392-42F2	0.00	0.00	0.00	0.00	0.00
diencephalon, adult.CNhs10482.20-12F2	0.00	0.00	0.00	0.00	0.00
diencephalon, neonate N30.CNhs11201.1388-42B2	0.00	0.00	0.16	0.00	0.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1	0.00	0.00	0.00	0.00	0.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2	0.00	0.00	0.12	0.00	0.00
epididymis, adult.CNhs10490.58-23B2	0.00	0.00	0.00	0.00	0.00
eyeball, adult.CNhs10484.31-12G4	0.00	0.00	0.00	0.00	0.00
eyeball, embryo E12.CNhs11016.345-16C6	0.00	0.00	0.00	0.00	0.00
eyeball, embryo E14.CNhs10521.399-16E2	0.00	0.00	0.00	0.00	0.00
eyeball, embryo E17.CNhs11023.1261-18D4	0.00	0.00	0.15	0.00	0.00
eyeball, neonate N00.CNhs11207.633-15C6	0.00	0.00	0.27	0.00	0.00
eyeball, neonate N01.CNhs11140.1532-43E7	0.00	0.00	0.13	0.00	0.00
eyeball, neonate N02.CNhs11205.1551-44G8	0.00	0.00	0.00	0.00	0.00
eyeball, neonate N16.CNhs11188.777-19A2	0.00	0.00	0.00	0.00	0.00
forelimb, embryo E11.CNhs10596.335-25E2	0.00	0.00	0.00	0.00	0.00
forelimb, embryo E12.CNhs10600.359-14H2	0.00	0.19	0.00	0.00	0.00
forelimb, embryo E13.CNhs10589.384-1E2	0.00	0.00	0.18	0.00	0.00
forelimb, embryo E14.CNhs10577.413-26A8	0.00	0.00	0.22	0.00	0.00
forelimb, embryo E15.CNhs11007.437-20E7	0.00	0.00	0.00	0.00	0.00
forelimb, embryo E17.CNhs10598.1517-43C4	0.00	0.00	0.35	0.00	0.00
forelimb, embryo E18.CNhs11008.1520-43B5	0.00	0.00	0.41	0.00	0.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8	0.00	0.00	0.00	0.00	0.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2	0.00	0.00	0.00	0.00	0.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5	0.00	0.00	0.00	0.00	0.00
heart, embryo E11.CNhs10586.331-24E9	0.00	0.00	0.00	0.00	0.00
heart, embryo E12.CNhs11015.353-12F5	0.00	0.00	0.00	0.00	0.00
heart, embryo E13.CNhs11013.376-3I9	0.00	0.00	0.00	0.00	0.00
heart, embryo E14.CNhs10597.403-26D4	0.00	0.00	0.00	0.00	0.00
heart, embryo E16.CNhs11021.457-17C6	0.00	0.00	0.00	0.00	0.00
heart, embryo E18.CNhs11030.1283-20G3	0.00	0.00	0.00	0.00	0.00
heart, neonate N03.CNhs11221.1349-25I2	0.00	0.00	0.00	0.00	0.00
hippocampus, adult.CNhs10478.13-16E8	0.00	0.00	0.00	0.00	0.00
hippocampus, neonate N00.CNhs11228.627-43G1	0.00	0.00	0.00	0.00	0.00
intestinal mucosa, adult.CNhs10506.860-29I3	0.00	0.00	0.00	0.00	0.00
intestine, adult.CNhs10496.178-9A3	0.00	0.00	0.00	0.00	0.00
intestine, embryo E12.CNhs11019.1251-16I5	0.00	0.00	0.00	0.00	0.00
intestine, embryo E13.CNhs11010.381-16D5	0.00	0.00	0.00	0.00	0.00
intestine, embryo E15.CNhs10602.976-16D8	0.00	0.00	0.00	0.00	0.00
intestine, embryo E16.CNhs10585.463-22H4	0.00	0.00	0.00	0.00	0.00
intestine, embryo E17.CNhs10582.482-18D3	0.00	0.00	0.00	0.00	0.00
intestine, embryo E18.CNhs10526.1289-20F7	0.00	0.00	0.00	0.00	0.00
intestine, neonate N00.CNhs11126.644-26D1	0.00	0.00	0.00	0.00	0.00
intestine, neonate N01.CNhs11192.1322-23E9	0.00	0.00	0.00	0.00	0.00
intestine, neonate N06.CNhs11102.688-20B8	0.00	0.00	0.00	0.00	0.00
intestine, neonate N07.CNhs11095.720-20F2	0.00	0.00	0.00	0.00	0.00
intestine, neonate N10.CNhs11098.755-23A5	0.00	0.00	0.00	0.00	0.00
intestine, neonate N20.CNhs11187.827-18D1	0.00	0.00	0.00	0.00	0.00
intestine, neonate N25.CNhs11121.1352-25E3	0.00	0.00	0.00	0.00	0.00
intestine, neonate N30.CNhs11131.1384-42G1	0.00	0.00	0.00	0.00	0.00
kidney, embryo E14.CNhs10606.411-4I9	0.00	0.00	0.00	0.00	0.00
kidney, embryo E15.CNhs10997.434-16F8	0.00	0.00	0.00	0.00	0.00
kidney, embryo E16.CNhs10584.464-22A5	0.00	0.00	0.00	0.00	0.00
kidney, embryo E17.CNhs11028.483-18I2	0.00	0.20	0.00	0.00	0.00
kidney, embryo E18.CNhs11001.1288-20C7	0.00	0.00	0.19	0.00	0.00
kidney, neonate N00.CNhs11214.646-21G7	0.00	0.00	0.00	0.00	0.00
kidney, neonate N10.CNhs11206.758-6D5	0.00	0.00	0.00	0.00	0.00
kidney, neonate N20.CNhs11113.832-19I1	0.00	0.00	0.00	0.00	0.00
kidney, neonate N25.CNhs11122.1353-25F3	0.00	0.00	0.00	0.00	0.00
kidney, neonate N30.CNhs11203.1385-42H1	0.00	0.00	0.00	0.00	0.00
liver, adult pregnant day01.CNhs10466.508-5B2	0.00	0.00	0.00	0.00	0.00
liver, embryo E12.CNhs10601.355-15F8	0.00	0.00	0.00	0.00	0.00
liver, embryo E13.CNhs10524.378-3H6	0.00	0.00	0.00	0.00	0.00
liver, embryo E14.CNhs10594.409-16E1	0.00	0.00	0.00	0.00	0.00
liver, embryo E15.CNhs10520.433-16D7	0.00	0.00	0.00	0.00	0.00
liver, embryo E16.CNhs10523.462-17F5	0.00	0.00	0.00	0.00	0.00
liver, embryo E17.CNhs10510.481-18A3	0.00	0.00	0.00	0.00	0.00
liver, embryo E18.CNhs10579.499-43G4	0.00	0.00	0.00	0.00	0.00
liver, neonate N00.CNhs11117.641-24F4	0.00	0.00	0.00	0.00	0.00
liver, neonate N03.CNhs11123.1345-25G2	0.00	0.00	0.00	0.00	0.00
liver, neonate N06.CNhs11101.684-20A8	0.00	0.00	0.00	0.00	0.00
liver, neonate N07.CNhs11103.716-20H2	0.00	0.00	0.00	0.00	0.00
liver, neonate N10.CNhs11115.751-24B9	0.00	0.00	0.31	0.00	0.00
liver, neonate N20.CNhs11220.823-25A3	0.00	0.00	0.00	0.00	0.00
liver, neonate N25.CNhs11198.1368-26H1	0.00	0.00	0.00	0.00	0.00
liver, neonate N30.CNhs11106.1382-42D1	0.00	0.00	0.00	0.00	0.00
lung, adult.CNhs10474.28-22B1	0.00	0.00	0.00	0.00	0.00
lung, embryo E12.CNhs10522.354-16G2	0.00	0.19	0.00	0.00	0.00
lung, embryo E14.CNhs10604.404-26F8	0.00	0.00	0.00	0.00	0.00
lung, embryo E15.CNhs11020.432-17C5	0.00	0.00	0.00	0.00	0.00
lung, embryo E16.CNhs10998.458-17B6	0.00	0.00	0.00	0.00	0.00
lung, embryo E18.CNhs10583.1287-20I6	0.00	0.00	0.00	0.00	0.00
lung, neonate N25.CNhs11119.1359-25C7	0.00	0.86	0.52	0.00	0.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1	0.00	0.00	0.00	0.00	0.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1	0.00	0.00	0.00	0.00	0.00
mammary gland, adult lactating day02.CNhs10480.595-22B6	0.00	0.00	0.00	0.00	0.00
mammary gland, adult pregnant day19.CNhs10476.588-5H2	0.00	0.00	0.28	0.00	0.00
medulla oblongata, adult.CNhs10477.17-12C2	0.00	0.00	0.00	0.00	0.00
medulla oblongata, neonate N30.CNhs11200.1396-42A3	0.00	0.00	0.00	0.00	0.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7	0.00	0.00	0.00	0.00	0.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2	0.00	1.26	0.76	0.00	0.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1	0.00	0.00	0.00	0.00	0.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2	0.00	0.00	0.00	0.00	0.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3	0.00	0.00	0.00	0.00	0.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7	0.00	0.00	0.00	0.00	0.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8	0.00	0.00	0.00	0.00	0.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9	0.00	0.00	0.00	0.00	0.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4	0.00	0.00	0.00	0.00	0.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5	0.00	0.00	0.00	0.00	0.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6	0.00	0.00	0.00	0.00	0.00
olfactory brain, adult.CNhs10489.18-22I9	0.00	0.00	0.00	0.00	0.00
ovary, adult.CNhs10507.91-2I7	0.00	0.00	0.00	0.00	0.00
ovary, embryo E18.CNhs11040.505-44H7	0.00	0.36	0.00	0.00	0.00
ovary, neonate N00.CNhs11217.1299-22I4	0.00	0.16	0.00	0.00	0.00
oviduct, adult pregnant day01.CNhs10500.988-6G6	0.00	0.00	0.00	0.00	0.00
pancreas, adult.CNhs10486.34-16E4	0.00	0.00	0.00	0.00	0.00
pancreas, embryo E14.CNhs11012.405-44F4	0.00	0.00	0.00	0.00	0.00
pancreas, embryo E15.CNhs11042.1556-45F2	0.00	0.00	0.00	0.00	0.00
pancreas, embryo E16.CNhs11003.460-26E5	0.00	0.00	0.00	0.00	0.00
pancreas, embryo E17.CNhs10599.1558-45G3	0.00	0.00	0.00	0.00	0.00
pancreas, embryo E18.CNhs10580.1535-43I7	0.00	0.00	0.00	0.00	0.00
pancreas, neonate N00.CNhs11105.645-26G9	0.00	0.00	0.00	0.00	0.00
pancreas, neonate N01.CNhs11138.1531-43D7	0.00	0.00	0.00	0.00	0.00
pancreas, neonate N02.CNhs11139.1539-43D8	0.00	0.71	1.07	0.00	0.00
pancreas, neonate N16.CNhs11136.787-43B6	0.00	0.00	0.00	0.00	0.00
pancreas, neonate N25.CNhs11094.1555-45E2	0.00	0.00	0.00	0.00	0.00
pancreas, neonate N30.CNhs11182.1548-44H5	0.00	0.00	0.00	0.00	0.00
pituitary gland, adult.CNhs10493.21-1G8	0.00	0.34	1.02	0.00	0.00
pituitary gland, embryo E12.CNhs11018.346-16E6	0.00	0.00	0.00	0.00	0.00
pituitary gland, embryo E13.CNhs11009.370-44C7	0.00	0.13	0.00	0.00	0.00
pituitary gland, embryo E14.CNhs11037.398-44A5	0.00	0.00	0.00	0.00	0.00
pituitary gland, embryo E15.CNhs10592.427-16B9	0.00	0.53	0.35	0.00	0.00
pituitary gland, embryo E16.CNhs11036.449-43F6	0.00	0.36	0.36	0.00	0.00
pituitary gland, embryo E17.CNhs11039.1265-44F5	0.00	0.00	0.00	0.00	0.00
pituitary gland, neonate N00.CNhs11190.1308-22E9	0.00	0.30	0.91	0.00	0.00
placenta, adult pregnant day10.CNhs10472.539-13I7	0.00	0.00	0.00	0.00	0.00
placenta, adult pregnant day17.CNhs10464.577-18G3	0.00	0.00	0.00	0.00	0.00
prostate, adult.CNhs10470.859-1F8	0.00	0.00	0.00	0.00	0.00
skin, adult.CNhs10492.30-1C3	0.00	0.00	0.00	0.00	0.00
skin, neonate N03.CNhs11215.662-22H3	0.00	0.18	0.12	0.00	0.00
skin, neonate N06.CNhs11097.693-20I5	0.00	0.00	0.00	0.00	0.00
skin, neonate N10.CNhs11108.762-6C4	0.00	0.00	0.16	0.00	0.00
spinal cord, adult.CNhs10505.24-13C9	0.00	0.00	0.00	0.00	0.00
spleen, embryo E16.CNhs11035.461-43C1	0.00	0.00	0.00	0.00	0.00
spleen, embryo E18.CNhs11011.1271-21F2	0.00	0.00	0.00	0.00	0.00
spleen, neonate N10.CNhs11116.752-24D1	0.00	0.00	0.00	0.00	0.00
spleen, neonate N20.CNhs11112.824-19H1	0.00	0.00	0.00	0.00	0.00
spleen, neonate N25.CNhs11099.1354-25G3	0.00	0.00	0.00	0.00	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6	0.00	0.00	0.00	0.00	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9	0.00	0.00	0.00	0.00	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3	0.00	0.00	0.00	0.00	0.00
stomach, adult.CNhs10503.33-1H6	0.00	0.00	0.95	0.00	0.00
stomach, embryo E12.CNhs10588.356-43E3	0.00	0.00	0.00	0.00	0.00
stomach, embryo E15.CNhs10603.1252-16G8	0.00	0.00	0.00	0.00	0.00
stomach, embryo E16.CNhs11022.459-17D4	0.00	0.00	0.00	0.00	0.00
stomach, embryo E17.CNhs11006.1035-18D5	0.00	0.00	0.00	0.00	0.00
stomach, embryo E18.CNhs10999.1286-20C6	0.00	0.00	0.00	0.00	0.00
stomach, neonate N03.CNhs11193.1340-24B8	0.00	0.00	0.00	0.00	0.00
stomach, neonate N25.CNhs11104.1355-25E4	0.00	1.57	0.26	0.00	0.00
stomach, neonate N30.CNhs11134.1386-42I1	0.00	0.00	0.00	0.00	0.00
submandibular gland, adult.CNhs10469.59-29C1	0.00	0.00	0.00	0.00	0.00
testis, adult.CNhs10504.57-7G5	0.00	0.00	0.00	0.00	0.00
testis, embryo E13.CNhs11031.389-23F5	0.00	0.00	0.00	0.00	0.00
testis, embryo E15.CNhs11034.443-27C5	0.00	0.00	0.00	0.00	0.00
testis, embryo E16.CNhs11033.470-26G5	0.00	0.00	0.00	0.00	0.00
testis, embryo E17.CNhs11029.486-18I5	0.00	0.00	0.00	0.00	0.00
testis, embryo E18.CNhs11027.503-18G5	0.00	0.00	0.00	0.00	0.00
testis, neonate N00.CNhs11189.1300-22B7	0.00	0.00	0.00	0.00	0.00
testis, neonate N07.CNhs11222.726-26I4	0.00	0.00	0.00	0.00	0.00
testis, neonate N10.CNhs11204.763-44D9	0.00	0.00	0.00	0.00	0.00
testis, neonate N20.CNhs11110.839-18H3	0.00	0.00	0.00	0.00	0.00
testis, neonate N30.CNhs11130.1391-42E2	0.00	0.00	0.00	0.00	0.00
tongue, adult.CNhs10499.32-1B4	0.00	0.00	0.00	0.00	0.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3	0.00	0.00	0.00	0.00	0.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7	0.00	0.00	0.00	0.00	0.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5	0.00	0.00	0.00	0.00	0.00
urinary bladder, adult.CNhs10481.879-12E4	0.00	0.00	0.00	0.00	0.00
uterus, adult pregnant day19.CNhs10497.590-15F5	0.00	0.00	0.00	0.00	0.00
uterus, adult.CNhs10509.92-27E5	0.00	0.00	0.00	0.00	0.00
vagina, adult.CNhs10502.89-27D5	0.00	0.00	0.00	0.00	0.00
vesicular gland, adult.CNhs10491.51-27F8	0.00	0.00	0.00	0.00	0.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1	0.00	0.00	0.00	0.00	0.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2	0.00	0.00	0.00	0.00	0.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3	0.00	0.00	0.00	0.00	0.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7	0.00	0.00	0.00	0.00	0.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4	0.00	0.00	0.00	0.00	0.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5	0.00	0.00	0.00	0.00	0.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6	0.00	0.00	0.00	0.00	0.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7	0.00	0.00	0.00	0.00	0.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8	0.00	0.00	0.00	0.00	0.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9	0.00	0.00	0.00	0.00	0.00
whole body, embryo E11.CNhs11014.324-5I8	0.00	0.00	0.00	0.00	0.00
whole body, embryo E12.CNhs10587.857-27C9	0.00	0.00	0.00	0.00	0.00
whole body, embryo E14.5.CNhs10578.420-27D2	0.00	0.24	0.00	0.00	0.00
whole body, embryo E14.CNhs10519.395-14B1	0.00	0.00	0.00	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5	0.00	1.24	1.24	0.00	0.00
whole body, embryo E17.CNhs10517.475-3I5	0.00	0.50	1.00	0.00	0.00
whole body, neonate N10.CNhs10518.761-6B4	0.00	2.78	1.39	0.00	0.00

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p1@Chrna9
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p5@Chrna9

• Click each plot point to find sample in table

ENCODE TF ChIP-seq peak enrichment analysis Analyst: Erik Arner <br>Summary: For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><br><br>link to source dataset.<br>data

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No analysis results for this cluster

Details<b>Summary:</b>It includes sequences from the international sequence collaboration, Swiss-Prot, and RefSeq. The RefSeq subset of this file is also available as gene2refseq.<br><br>links to source dataset.<br>human <br>mouse

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GeneID:	231252
LocusTag:	-
chromosome:	5
map location:	5 C3.1, 5 41.0 cM, 5 C3.1;;5 41.0 cM
type of gene:	protein-coding
Symbol from nomenclature authority:	Chrna9
Full name from nomenclature authority:	cholinergic receptor, nicotinic, alpha polypeptide 9
Nomenclature status:	O
Other designations:	neuronal acetylcholine receptor subunit alpha-9
Modification date:	15.01.2012