EntrezGene:19268

Symbol:	Ptprf
Description:	protein tyrosine phosphatase, receptor type, F
Synonyms:	AA591035, LAR, LARS, RPTP-LAR
Species:	Mouse (Mus musculus)
Xrefs:	ExpandEntrezGene:19268 MGI:102695 Ensembl:ENSMUSG00000033295 Vega:OTTMUSG00000008720
Associated motifs:	NA
Transcripton Factor?:	No

TSS regions

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Mm9::chr4:117963910..117963930,-	p2@Ptprf
Mm9::chr4:117963945..117964009,-	p1@Ptprf
Mm9::chr4:117964024..117964035,-	p3@Ptprf
TSS peak ID	Short_description

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TSS expression

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Sample	p1@Ptprf	p2@Ptprf	p3@Ptprf

Sample	p1@Ptprf	p2@Ptprf	p3@Ptprf
CD326+ enterocyte, pool2.CNhs13197.11849-124I4	314.56	13.02	4.01
CD326+ enterocyte, pool1.CNhs13542.11848-124I3	311.84	12.70	3.33
intestinal mucosa, adult.CNhs10506.860-29I3	161.24	2.31	4.30
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5	144.13	7.68	1.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6	136.95	4.55	4.55
GP2+ M cell, pool1.CNhs13228.11845-124H9	95.90	6.89	0.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6	92.44	0.00	0.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6	92.39	2.54	1.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8	89.18	0.00	2.55
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3	88.85	2.33	4.86
lung, neonate N00.CNhs11224.640-42C6	83.52	6.44	1.37
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2	82.63	2.18	2.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8	80.19	1.76	1.76
Ileum epithelium, pool2.CNhs13232.10253-104C1	79.89	4.03	1.01
intestine, neonate N00.CNhs11126.644-26D1	72.13	3.32	1.90
GP2+ M cell, pool2.CNhs13231.11846-124I1	71.94	6.03	0.43
vesicular gland, adult.CNhs10491.51-27F8	71.72	2.51	1.00
lung, embryo E18.CNhs10583.1287-20I6	69.98	5.95	1.67
intestine, neonate N30.CNhs11131.1384-42G1	68.70	4.18	1.59
Mouse hepatocyte, donor6.CNhs13090.11822-124F4	67.58	4.55	0.65
small intestine, neonate N16.CNhs11114.790-21I1	66.17	2.04	0.87
skin, adult.CNhs10492.30-1C3	65.95	2.97	2.31
vagina, adult.CNhs10502.89-27D5	65.38	3.64	1.93
lung, embryo E17.CNhs10605.480-44A6	64.49	5.03	0.50
intestine, neonate N25.CNhs11121.1352-25E3	63.33	1.73	0.43
Mouse hepatocyte, donor3.CNhs12615.11637-122C8	62.07	4.32	2.16
skin, neonate N10.CNhs11108.762-6C4	61.88	3.94	1.81
intestine, neonate N06.CNhs11102.688-20B8	60.82	2.51	0.75
colon, adult.CNhs10468.36-18H7	60.80	2.55	1.79
lung, neonate N30.CNhs11133.1394-42H2	59.60	2.89	1.30
skin, neonate N06.CNhs11097.693-20I5	59.45	3.58	1.79
Mouse Microglia, donor2.CNhs12634.11736-123E8	58.79	1.54	0.38
intestine, neonate N20.CNhs11187.827-18D1	58.42	2.70	0.00
Ileum epithelium, pool1.CNhs13199.10252-104B9	57.20	4.18	0.00
pancreas, neonate N02.CNhs11139.1539-43D8	56.68	4.63	0.71
testis, neonate N07.CNhs11222.726-26I4	56.64	3.26	3.39
pituitary gland, embryo E13.CNhs11009.370-44C7	55.49	2.72	0.91
lung, neonate N10.CNhs11219.750-23E6	55.33	3.51	1.75
pituitary gland, embryo E15.CNhs10592.427-16B9	55.33	3.55	0.53
lung, neonate N25.CNhs11119.1359-25C7	53.53	2.42	1.21
stomach, embryo E15.CNhs10603.1252-16G8	53.27	1.83	0.81
Mouse Astrocytes, donor3.CNhs12107.11633-122C4	53.19	4.31	1.44
pancreas, neonate N01.CNhs11138.1531-43D7	52.71	3.64	0.73
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7	52.55	5.20	0.34
pituitary gland, embryo E14.CNhs11037.398-44A5	52.51	1.71	0.64
intestine, neonate N07.CNhs11095.720-20F2	51.73	1.99	0.99
liver, neonate N10.CNhs11115.751-24B9	50.86	0.94	0.62
pituitary gland, embryo E16.CNhs11036.449-43F6	49.76	1.25	0.71
pancreas, embryo E15.CNhs11042.1556-45F2	49.58	2.72	0.60
intestine, neonate N10.CNhs11098.755-23A5	49.52	3.51	0.19
pituitary gland, embryo E12.CNhs11018.346-16E6	48.98	1.44	0.72
skin, neonate N03.CNhs11215.662-22H3	48.85	2.53	1.39
pancreas, embryo E17.CNhs10599.1558-45G3	48.43	2.95	1.48
pituitary gland, neonate N00.CNhs11190.1308-22E9	48.11	3.96	0.00
lung, neonate N20.CNhs11109.822-18A4	47.85	2.62	0.49
lung, neonate N07.CNhs11111.715-19A3	47.17	2.44	0.89
pituitary gland, embryo E17.CNhs11039.1265-44F5	46.73	3.78	0.49
GP2+ M cell, pool3.CNhs13240.11847-124I2	46.54	2.80	0.86
liver, neonate N06.CNhs11101.684-20A8	46.01	4.31	0.00
pancreas, embryo E14.CNhs11012.405-44F4	45.89	2.67	1.46
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4	45.74	2.02	0.81
pancreas, embryo E16.CNhs11003.460-26E5	45.64	1.89	1.51
urinary bladder, adult.CNhs10481.879-12E4	45.59	3.09	1.16
liver, neonate N07.CNhs11103.716-20H2	45.40	2.98	1.49
lung, neonate N06.CNhs11212.683-20E5	45.40	3.78	0.95
Mouse Astrocytes, donor2.CNhs12078.11552-120C4	45.36	1.26	2.10
intestine, embryo E18.CNhs10526.1289-20F7	44.13	2.47	0.76
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4	44.01	1.01	1.01
lung, adult.CNhs10474.28-22B1	43.23	2.77	1.11
stomach, neonate N07.CNhs11210.718-18A9	43.06	3.47	0.99
testis, embryo E17.CNhs11029.486-18I5	43.01	1.03	2.07
testis, neonate N00.CNhs11189.1300-22B7	42.84	3.52	1.29
liver, neonate N20.CNhs11220.823-25A3	42.69	3.28	1.01
forelimb, embryo E18.CNhs11008.1520-43B5	42.60	1.03	1.03
skin, neonate N00.CNhs11124.650-25G4	42.14	1.94	0.00
pancreas, neonate N00.CNhs11105.645-26G9	42.12	1.29	1.29
stomach, embryo E16.CNhs11022.459-17D4	41.58	2.05	0.97
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7	41.45	2.45	0.61
lung, embryo E16.CNhs10998.458-17B6	41.07	3.29	0.70
testis, embryo E18.CNhs11027.503-18G5	40.89	1.35	1.35
intestine, embryo E17.CNhs10582.482-18D3	39.81	1.56	0.22
testis, embryo E16.CNhs11033.470-26G5	39.08	1.36	1.17
intestine, neonate N01.CNhs11192.1322-23E9	38.37	1.98	0.16
stomach, neonate N30.CNhs11134.1386-42I1	38.37	2.33	0.52
tongue, adult.CNhs10499.32-1B4	38.32	3.17	0.68
pancreas, neonate N30.CNhs11182.1548-44H5	38.16	8.25	0.00
stomach, embryo E18.CNhs10999.1286-20C6	37.78	1.53	0.44
pancreas, embryo E18.CNhs10580.1535-43I7	37.51	3.38	0.61
whole body, embryo E17.5.CNhs10513.490-9F9	37.42	1.35	0.77
ovary, embryo E18.CNhs11040.505-44H7	37.39	1.78	0.36
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5	37.23	1.16	0.58
kidney, neonate N10.CNhs11206.758-6D5	37.18	1.39	0.82
stomach, embryo E12.CNhs10588.356-43E3	37.17	0.95	0.95
intestine, adult.CNhs10496.178-9A3	37.02	4.23	0.26
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7	37.00	1.72	2.58
stomach, embryo E17.CNhs11006.1035-18D5	36.80	1.88	0.63
kidney, neonate N25.CNhs11122.1353-25F3	36.74	2.20	0.63
eyeball, adult.CNhs10484.31-12G4	36.62	0.63	0.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5	36.55	1.58	1.38
kidney, neonate N00.CNhs11214.646-21G7	36.47	2.24	0.70
forelimb, embryo E15.CNhs11007.437-20E7	36.15	1.67	0.56
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4	35.87	1.32	0.26
stomach, neonate N03.CNhs11193.1340-24B8	35.87	2.56	0.00
intestine, embryo E15.CNhs10602.976-16D8	35.83	1.55	0.90
eyeball, embryo E15.CNhs10593.426-16C9	35.65	1.62	0.72
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9	35.54	0.84	0.42
liver, neonate N03.CNhs11123.1345-25G2	35.42	1.65	0.27
liver, adult pregnant day01.CNhs10466.508-5B2	35.28	1.78	0.30
testis, neonate N10.CNhs11204.763-44D9	35.23	2.20	1.68
forelimb, embryo E11.CNhs10596.335-25E2	35.14	0.86	0.65
kidney, neonate N20.CNhs11113.832-19I1	35.13	2.66	0.59
intestine, embryo E16.CNhs10585.463-22H4	34.89	1.41	0.81
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1	34.85	0.57	0.86
forelimb, embryo E17.CNhs10598.1517-43C4	34.83	1.39	1.04
Mouse Granule cells, donor1.CNhs12131.11713-123C3	34.80	1.42	0.40
liver, neonate N25.CNhs11198.1368-26H1	34.80	1.26	0.90
thymus, embryo E14.CNhs11041.402-44I4	34.67	0.81	0.41
testis, embryo E13.CNhs11031.389-23F5	34.54	1.35	1.50
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6	34.48	2.51	0.23
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5	34.37	2.31	0.58
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5	34.32	1.34	0.64
prostate, adult.CNhs10470.859-1F8	34.18	2.21	0.44
epididymis, adult.CNhs10490.58-23B2	34.12	0.76	1.26
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5	33.84	1.62	1.04
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5	33.62	1.12	1.12
Mouse hepatocyte, donor8.CNhs13091.11824-124F6	33.60	4.48	0.90
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5	33.49	1.45	0.41
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5	33.38	1.24	0.82
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5	33.38	1.43	0.48
Mouse Microglia, donor1.CNhs12629.11718-123C8	33.26	0.90	0.30
intestine, embryo E13.CNhs11010.381-16D5	33.21	1.39	0.46
mammary gland, adult pregnant day19.CNhs10476.588-5H2	33.11	3.31	0.00
stomach, neonate N25.CNhs11104.1355-25E4	32.98	0.79	0.26
whole body, embryo E17.CNhs10517.475-3I5	32.97	2.50	0.75
intestine, embryo E12.CNhs11019.1251-16I5	32.85	2.13	0.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6	32.70	0.88	0.59
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5	32.62	1.03	0.57
Mouse Schwann, donor1.CNhs12507.11728-123D9	32.56	0.68	0.68
eyeball, embryo E12.CNhs11016.345-16C6	32.40	1.69	0.39
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5	32.32	1.63	0.68
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8	32.30	0.52	0.52
kidney, neonate N30.CNhs11203.1385-42H1	32.08	2.10	0.12
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8	32.00	4.91	0.23
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1	31.87	0.56	0.19
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5	31.68	0.71	0.59
pancreas, neonate N25.CNhs11094.1555-45E2	31.63	8.43	0.00
ovary, neonate N00.CNhs11217.1299-22I4	31.44	1.14	0.98
corpus striatum, neonate N00.CNhs11226.630-43F1	31.41	0.50	0.63
forelimb, embryo E12.CNhs10600.359-14H2	31.39	1.51	0.95
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7	31.30	1.67	0.72
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5	31.14	1.08	0.77
liver, neonate N30.CNhs11106.1382-42D1	30.88	3.38	0.96
lung, embryo E15.CNhs11020.432-17C5	30.72	2.04	0.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3	30.59	1.29	0.22
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5	30.48	0.88	1.33
kidney, embryo E16.CNhs10584.464-22A5	30.43	0.00	1.13
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9	30.29	1.13	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5	30.16	1.52	0.25
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6	30.04	1.58	0.40
whole body, neonate N00.CNhs10525.657-19C2	29.87	1.07	0.43
forelimb, embryo E13.CNhs10589.384-1E2	29.74	0.53	0.18
eyeball, neonate N00.CNhs11207.633-15C6	29.60	1.77	0.61
kidney, embryo E15.CNhs10997.434-16F8	29.59	1.94	0.80
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5	29.52	0.32	0.96
whole body, embryo E18.CNhs10516.493-3B3	29.48	1.17	0.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2	29.28	2.34	0.00
eyeball, neonate N02.CNhs11205.1551-44G8	29.23	1.12	0.56
whole body, embryo E12.CNhs10587.857-27C9	29.13	2.00	0.40
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8	28.96	1.78	0.22
testis, embryo E15.CNhs11034.443-27C5	28.96	0.66	1.16
eyeball, embryo E17.CNhs11023.1261-18D4	28.94	1.21	0.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6	28.76	2.33	0.17
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8	28.60	3.10	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5	28.58	2.38	1.43
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6	28.47	0.43	0.85
thymus, embryo E16.CNhs11002.456-26C5	28.45	1.30	0.39
forelimb, embryo E14.CNhs10577.413-26A8	28.28	0.88	0.88
pancreas, neonate N16.CNhs11136.787-43B6	28.13	4.42	0.63
lung, embryo E12.CNhs10522.354-16G2	28.04	0.95	0.57
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5	28.01	1.18	0.34
cecum, adult.CNhs10467.37-13H4	27.96	1.86	0.00
pituitary gland, adult.CNhs10493.21-1G8	27.92	1.70	0.34
thymus, embryo E15.CNhs11005.430-45I2	27.83	1.23	0.31
thymus, embryo E18.CNhs10595.1273-19G4	27.82	0.99	0.79
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5	27.78	0.44	0.44
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5	27.68	0.81	0.27
oviduct, adult pregnant day01.CNhs10500.988-6G6	27.39	1.98	0.49
kidney, embryo E18.CNhs11001.1288-20C7	27.35	2.72	0.19
submandibular gland, adult.CNhs10469.59-29C1	27.34	4.97	0.00
thymus, neonate N07.CNhs11211.713-19D3	27.28	1.07	0.69
lung, embryo E14.CNhs10604.404-26F8	27.22	2.28	0.49
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1	27.13	1.58	0.00
eyeball, embryo E14.CNhs10521.399-16E2	26.90	1.15	0.23
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5	26.62	1.77	0.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5	26.60	0.41	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5	26.50	0.59	0.59
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5	26.35	1.41	0.66
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5	26.16	1.65	0.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2	26.07	0.67	0.10
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5	26.03	1.01	0.51
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2	25.92	3.21	0.46
kidney, embryo E17.CNhs11028.483-18I2	25.86	1.63	0.20
Mouse hepatocyte, donor1.CNhs13078.11714-123C4	25.84	2.04	2.04
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5	25.78	0.26	0.79
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5	25.72	1.46	0.58
uterus, adult.CNhs10509.92-27E5	25.64	1.47	0.92
thymus, neonate N25.CNhs11125.1362-25G7	25.59	1.15	0.67
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1	25.56	1.53	0.51
thymus, embryo E17.CNhs10581.478-18C1	25.42	1.97	0.18
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5	25.28	0.75	0.19
whole body, embryo E13.CNhs10512.372-23H2	24.59	0.34	1.02
spleen, embryo E16.CNhs11035.461-43C1	24.56	1.24	1.24
thymus, neonate N30.CNhs11132.1393-42G2	24.54	0.82	0.70
thymus, neonate N03.CNhs11137.2104-43C7	24.52	1.18	0.59
gonad, embryo E13.CNhs11044.1564-45I6	24.28	1.39	0.40
adrenal gland, embryo E14.CNhs11038.406-44C5	24.11	0.35	0.87
Mouse Granule cells, donor3.CNhs12108.11636-122C7	24.09	0.63	0.63
mammary gland, adult lactating day02.CNhs10480.595-22B6	23.60	1.97	0.49
kidney, embryo E14.CNhs10606.411-4I9	23.33	1.14	0.57
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5	23.07	0.00	0.56
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6	23.04	1.02	0.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7	23.03	2.53	0.14
whole body, embryo E14.5.CNhs10578.420-27D2	22.85	0.49	1.94
eyeball, neonate N01.CNhs11140.1532-43E7	22.80	1.92	0.51
Mouse Granule cells, donor2.CNhs12357.11731-123E3	22.75	0.53	0.53
thymus, neonate N02.CNhs11181.1541-43F8	22.72	2.16	0.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5	22.69	1.03	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5	22.53	0.73	0.44
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3	22.37	1.11	0.00
Mouse Schwann, donor2.CNhs12573.11746-123F9	22.22	0.45	0.15
thymus, neonate N06.CNhs11197.681-26C4	22.21	0.91	0.71
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1	22.06	0.57	0.57
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1	21.82	0.00	1.28
thymus, adult.CNhs10471.38-12B5	21.49	0.63	0.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1	21.34	0.00	0.00
hippocampus, neonate N00.CNhs11228.627-43G1	21.30	0.51	0.10
heart, embryo E11.CNhs10586.331-24E9	21.13	1.04	0.21
thymus, neonate N10.CNhs11194.748-24E4	20.87	1.31	0.71
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1	20.80	3.04	0.48
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5	20.57	1.03	0.69
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3	20.30	0.13	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3	20.22	1.52	1.01
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5	20.19	1.03	0.21
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6	20.17	0.31	0.15
liver, embryo E18.CNhs10579.499-43G4	20.14	0.86	0.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7	19.97	0.15	0.46
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7	19.56	0.00	0.00
heart, embryo E14.CNhs10597.403-26D4	19.41	0.95	0.24
eyeball, neonate N16.CNhs11188.777-19A2	19.14	1.55	0.52
liver, embryo E17.CNhs10510.481-18A3	19.10	1.02	0.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2	18.86	0.61	0.37
ovary, adult.CNhs10507.91-2I7	18.74	0.43	0.14
pancreas, adult.CNhs10486.34-16E4	18.58	3.98	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2	18.24	2.28	0.76
adrenal gland, neonate N00.CNhs11191.1311-23C1	18.23	0.82	0.71
thymus, neonate N20.CNhs11186.820-7A2	18.22	1.07	0.78
whole body, embryo E16.CNhs10514.453-14F2	18.20	0.37	0.18
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4	17.87	0.84	0.00
amnion, adult pregnant day17.5.CNhs10488.583-22A8	17.55	1.48	0.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6	17.47	0.92	0.00
adrenal gland, embryo E17.CNhs11043.1263-45I1	17.30	1.38	0.46
adrenal gland, embryo E16.CNhs11004.1254-43D6	17.05	0.91	0.61
medulla oblongata, neonate N30.CNhs11200.1396-42A3	16.76	0.59	0.23
cortex, neonate N30.CNhs11107.1392-42F2	16.37	0.51	0.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1	16.24	0.87	1.95
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3	16.23	1.74	0.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2	16.11	0.46	0.00
whole body, embryo E11.CNhs11014.324-5I8	16.09	0.31	0.10
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1	15.95	0.51	0.26
diencephalon, neonate N30.CNhs11201.1388-42B2	15.90	0.49	0.16
corpora quadrigemina, adult.CNhs10501.16-22A4	15.73	0.75	0.00
heart, embryo E12.CNhs11015.353-12F5	15.71	1.17	0.47
liver, embryo E16.CNhs10523.462-17F5	15.44	0.48	0.72
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2	15.43	0.37	0.37
whole body, neonate N06.CNhs10515.692-21D1	15.22	1.32	0.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5	15.15	1.12	0.00
spinal cord, adult.CNhs10505.24-13C9	15.02	0.37	0.56
liver, neonate N00.CNhs11117.641-24F4	14.75	0.16	0.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1	14.68	0.00	0.56
corpus striatum, adult.CNhs10487.19-21D8	14.64	0.00	0.46
heart, embryo E13.CNhs11013.376-3I9	14.40	0.36	0.54
stomach, adult.CNhs10503.33-1H6	14.32	1.91	0.95
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3	14.21	0.67	0.44
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6	14.18	0.68	0.00
uterus, adult pregnant day19.CNhs10497.590-15F5	13.70	0.38	0.38
adrenal gland, embryo E18.CNhs11026.1262-18F5	13.41	1.21	0.15
adrenal gland, neonate N25.CNhs11223.1377-27I3	13.07	0.50	0.13
olfactory brain, adult.CNhs10489.18-22I9	12.85	0.32	0.64
bone (os femoris), neonate N02.CNhs11227.1985-43F5	12.62	0.65	0.65
liver, embryo E13.CNhs10524.378-3H6	12.58	0.98	0.39
liver, embryo E15.CNhs10520.433-16D7	12.58	0.81	0.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9	12.43	0.52	1.04
medulla oblongata, adult.CNhs10477.17-12C2	12.20	0.80	0.16
whole body, embryo E14.CNhs10519.395-14B1	12.16	0.21	0.42
diencephalon, adult.CNhs10482.20-12F2	11.84	0.62	0.21
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7	11.69	0.34	0.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3	11.46	1.15	0.57
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8	11.33	0.00	0.00
heart, embryo E18.CNhs11030.1283-20G3	11.27	0.80	0.27
adrenal gland, adult.CNhs10508.49-24D7	10.98	0.59	0.45
hippocampus, adult.CNhs10478.13-16E8	10.72	0.21	0.84
heart, neonate N03.CNhs11221.1349-25I2	10.70	0.16	0.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5	10.58	0.00	0.00
liver, embryo E12.CNhs10601.355-15F8	10.51	0.67	0.33
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7	10.36	0.45	0.00
whole body, neonate N01.CNhs10576.659-23C6	10.33	0.77	0.57
placenta, adult pregnant day17.CNhs10464.577-18G3	10.17	0.21	0.21
spleen, embryo E18.CNhs11011.1271-21F2	9.82	1.30	0.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5	9.74	0.67	0.00
heart, embryo E16.CNhs11021.457-17C6	9.41	0.46	0.15
cortex, adult.CNhs10473.12-14D5	9.39	0.17	0.17
heart, embryo E17.CNhs11025.479-18E5	9.30	1.63	0.23
heart, embryo E15.CNhs11017.431-16C8	9.25	0.59	0.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3	9.18	0.73	0.18
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4	8.91	0.00	0.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3	8.81	0.00	0.00
liver, embryo E14.CNhs10594.409-16E1	8.77	0.22	0.45
bone (os femoris), neonate N20.CNhs11195.1350-25C3	8.24	0.48	0.00
testis, neonate N30.CNhs11130.1391-42E2	8.06	0.00	0.58
heart, neonate N00.CNhs11213.639-21E3	7.82	0.35	0.35
bone (os femoris), neonate N16.CNhs11225.1525-43A6	7.51	0.00	0.22
placenta, adult pregnant day10.CNhs10472.539-13I7	7.51	0.23	0.47
testis, neonate N20.CNhs11110.839-18H3	7.49	0.24	0.00
heart, neonate N20.CNhs11127.821-26I6	7.31	0.29	0.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7	6.89	0.16	0.00
heart, neonate N10.CNhs11118.749-24G1	6.73	0.33	0.16
heart, neonate N16.CNhs11209.782-15G1	6.08	0.24	0.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2	6.06	0.30	0.10
cerebellum, neonate N30.CNhs11135.1395-42I2	5.86	0.42	0.00
whole body, neonate N10.CNhs10518.761-6B4	5.80	0.00	0.23
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9	5.68	0.20	0.10
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8	5.41	0.50	0.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7	5.20	0.36	0.18
testis, adult.CNhs10504.57-7G5	5.07	0.00	0.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2	4.80	0.00	0.25
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1	4.07	0.00	0.08
heart, neonate N25.CNhs11196.1351-25D3	3.51	0.44	0.00
spleen, neonate N25.CNhs11099.1354-25G3	3.43	0.00	0.00
heart, neonate N30.CNhs11202.1390-42D2	3.22	0.67	0.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9	3.13	0.00	0.00
aorta, adult.CNhs10498.46-23H1	3.04	0.29	0.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8	2.83	0.00	0.00
cerebellum, adult.CNhs10494.15-8B2	2.34	0.00	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2	2.13	0.00	0.00
accessory axillary lymph node, adult.CNhs10475.1063-29H9	2.07	0.52	0.26
spleen, neonate N20.CNhs11112.824-19H1	1.91	0.00	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7	1.80	0.45	0.00
bone (os femoris), adult.CNhs10483.56-12G2	1.77	0.88	0.00
spleen, neonate N10.CNhs11116.752-24D1	1.70	0.00	0.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9	1.55	0.00	0.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7	1.53	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6	1.20	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2	1.17	0.00	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7	0.99	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8	0.79	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7	0.56	0.14	0.00
spleen, adult.CNhs10465.25-2G2	0.51	0.00	0.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3	0.40	0.00	0.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4	0.38	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4	0.34	0.00	0.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1	0.34	0.00	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6	0.34	0.00	0.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1	0.33	0.00	0.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5	0.28	0.00	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3	0.28	0.00	0.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3	0.26	0.26	0.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7	0.24	0.00	0.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4	0.14	0.00	0.00
Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7	0.00	0.00	0.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5	0.00	0.00	0.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2	0.00	0.00	0.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4	0.00	0.00	0.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2	0.00	0.00	0.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9	0.00	0.00	0.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1	0.00	0.00	0.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8	0.00	0.00	0.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2	0.00	0.00	0.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1	0.00	0.00	0.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1	0.00	0.00	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9	0.00	0.14	0.00

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p1@Ptprf
p2@Ptprf
p3@Ptprf

• Click each plot point to find sample in table

ENCODE TF ChIP-seq peak enrichment analysis Analyst: Erik Arner <br>Summary: For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><br><br>link to source dataset.<br>data

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No analysis results for this cluster

Details<b>Summary:</b>It includes sequences from the international sequence collaboration, Swiss-Prot, and RefSeq. The RefSeq subset of this file is also available as gene2refseq.<br><br>links to source dataset.<br>human <br>mouse

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GeneID:	19268
LocusTag:	RP23-94L18.2
chromosome:	4
map location:	4, 4 C6-D1, 4;;4 C6-D1
type of gene:	protein-coding
Symbol from nomenclature authority:	Ptprf
Full name from nomenclature authority:	protein tyrosine phosphatase, receptor type, F
Nomenclature status:	O
Other designations:	leukocyte antigen-related (LAR) PTP receptor, leukocyte common antigen related, receptor-type tyrosine-protein phosphatase F, leukocyte antigen-related (LAR) PTP receptor;;leukocyte common antigen related;;receptor-type tyrosine-protein phosphatase F
Modification date:	08.01.2012