FFCP PHASE2:Mm9::chr2:66248140..66248191,-
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Short description: | p1@Scn1a |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Scn1a_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -19bp_to_ENSMUST00000112366_5end |
EntrezGene: | Scn1a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@Scn1a |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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CNS neuron (sensu Vertebrata) | 3.76e-16 | 23 |
neuroblast (sensu Vertebrata) | 3.76e-16 | 23 |
neuron | 9.13e-11 | 33 |
neuronal stem cell | 9.13e-11 | 33 |
neuroblast | 9.13e-11 | 33 |
electrically signaling cell | 9.13e-11 | 33 |
electrically responsive cell | 5.39e-08 | 39 |
electrically active cell | 5.39e-08 | 39 |
Showing 1 to 8 of 8 entries
Ontology term | p-value | n |
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regional part of nervous system | 6.25e-34 | 54 |
neurectoderm | 3.41e-33 | 64 |
neural plate | 3.41e-33 | 64 |
presumptive neural plate | 3.41e-33 | 64 |
neural tube | 5.79e-32 | 52 |
neural rod | 5.79e-32 | 52 |
future spinal cord | 5.79e-32 | 52 |
neural keel | 5.79e-32 | 52 |
central nervous system | 3.71e-28 | 73 |
ecto-epithelium | 7.00e-28 | 73 |
Showing 1 to 10 of 41 entries