Personal tools

FFCP PHASE2:Mm9::chr19:7557731..7557769,-

From FANTOM5_SSTAR

Revision as of 13:25, 4 August 2015 by Autoedit (talk | contribs) (Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:20168 |HGNC= |MCL_coexpression_id=1 |TSSclassifier=NA |UniProt=uniprot:Q9ES97 |association_with_transcript=1bp_to_E...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Short description:p1@Rtn3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rtn3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 1bp_to_ENSMUST00000025667, NM_053076_5end
EntrezGene:20168
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rtn3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G762.62
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I536.99
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I631.39
CD326+ enterocyte, pool1.CNhs13542.11848-124I321.47
CD326+ enterocyte, pool2.CNhs13197.11849-124I430.05
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I726.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I834.57
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E964.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E728.30
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F235.58
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E613.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F118.19
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E463.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E865.48
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A180.95
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A366.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A574.85
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A274.76
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A472.12
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A667.48
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3135.56
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H290.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I994.55
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D159.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D260.11
GP2+ M cell, pool1.CNhs13228.11845-124H933.31
GP2+ M cell, pool2.CNhs13231.11846-124I130.15
GP2+ M cell, pool3.CNhs13240.11847-124I235.55
Ileum epithelium, pool1.CNhs13199.10252-104B952.83
Ileum epithelium, pool2.CNhs13232.10253-104C150.91
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C859.65
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I324.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G627.68
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F537.84
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F645.05
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F733.48
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8387.98
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1266.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3315.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9392.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2351.77
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4366.07
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D858.29
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D954.95
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B342.58
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7101.71
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2138.23
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B885.90
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3121.91
Mouse Astrocytes, donor2.CNhs12078.11552-120C4134.53
Mouse Astrocytes, donor3.CNhs12107.11633-122C4165.32
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A288.25
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I965.28
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A183.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C145.53
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E159.31
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C553.63
Mouse Granule cells, donor1.CNhs12131.11713-123C3265.84
Mouse Granule cells, donor2.CNhs12357.11731-123E3386.69
Mouse Granule cells, donor3.CNhs12108.11636-122C7313.11
Mouse Meningeal cells, donor1.CNhs12132.11716-123C662.35
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1110.27
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7120.59
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7132.51
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D296.63
Mouse Microglia, donor1.CNhs12629.11718-123C8145.31
Mouse Microglia, donor2.CNhs12634.11736-123E8136.01
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5166.11
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5179.02
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9178.99
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1530.45
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5496.07
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2192.43
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2181.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6255.54
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31030.68
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3598.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7709.82
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4354.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4351.95
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8313.59
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4661.38
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5502.55
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6556.49
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6525.62
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6450.61
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1302.90
Mouse Schwann, donor1.CNhs12507.11728-123D921.05
Mouse Schwann, donor2.CNhs12573.11746-123F950.94
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G343.77
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F760.23
Mouse hepatocyte, donor1.CNhs13078.11714-123C469.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C8119.27
Mouse hepatocyte, donor6.CNhs13090.11822-124F4151.40
Mouse hepatocyte, donor8.CNhs13091.11824-124F6118.73
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A792.55
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I728.80
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E323.64
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I831.45
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6106.62
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H119.25
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G130.74
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G234.71
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G332.35
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B686.32
accessory axillary lymph node, adult.CNhs10475.1063-29H997.10
adrenal gland, adult.CNhs10508.49-24D759.38
adrenal gland, embryo E14.CNhs11038.406-44C568.35
adrenal gland, embryo E16.CNhs11004.1254-43D663.33
adrenal gland, embryo E17.CNhs11043.1263-45I170.57
adrenal gland, embryo E18.CNhs11026.1262-18F553.51
adrenal gland, neonate N00.CNhs11191.1311-23C165.14
adrenal gland, neonate N25.CNhs11223.1377-27I338.08
amnion, adult pregnant day17.5.CNhs10488.583-22A872.68
aorta, adult.CNhs10498.46-23H193.84
bone (os femoris), adult.CNhs10483.56-12G2168.96
bone (os femoris), neonate N02.CNhs11227.1985-43F549.18
bone (os femoris), neonate N16.CNhs11225.1525-43A671.33
bone (os femoris), neonate N20.CNhs11195.1350-25C373.70
cecum, adult.CNhs10467.37-13H450.33
cerebellum, adult.CNhs10494.15-8B2308.88
cerebellum, neonate N30.CNhs11135.1395-42I2221.59
colon, adult.CNhs10468.36-18H761.31
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7110.47
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D179.19
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4113.85
corpora quadrigemina, adult.CNhs10501.16-22A4650.09
corpus striatum, adult.CNhs10487.19-21D8457.04
corpus striatum, neonate N00.CNhs11226.630-43F1231.46
cortex, adult.CNhs10473.12-14D5646.97
cortex, neonate N30.CNhs11107.1392-42F2588.91
diencephalon, adult.CNhs10482.20-12F2572.25
diencephalon, neonate N30.CNhs11201.1388-42B2513.01
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B172.82
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A293.43
epididymis, adult.CNhs10490.58-23B2215.07
eyeball, adult.CNhs10484.31-12G4200.34
eyeball, embryo E12.CNhs11016.345-16C671.57
eyeball, embryo E14.CNhs10521.399-16E278.40
eyeball, embryo E15.CNhs10593.426-16C999.93
eyeball, embryo E17.CNhs11023.1261-18D499.47
eyeball, neonate N00.CNhs11207.633-15C6139.54
eyeball, neonate N01.CNhs11140.1532-43E7129.01
eyeball, neonate N02.CNhs11205.1551-44G8123.12
eyeball, neonate N16.CNhs11188.777-19A2199.72
forelimb, embryo E11.CNhs10596.335-25E293.34
forelimb, embryo E12.CNhs10600.359-14H270.35
forelimb, embryo E13.CNhs10589.384-1E266.69
forelimb, embryo E14.CNhs10577.413-26A868.61
forelimb, embryo E15.CNhs11007.437-20E769.51
forelimb, embryo E17.CNhs10598.1517-43C457.11
forelimb, embryo E18.CNhs11008.1520-43B550.01
gonad, embryo E13.CNhs11044.1564-45I657.32
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8127.10
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2137.42
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5132.42
heart, embryo E11.CNhs10586.331-24E9105.22
heart, embryo E12.CNhs11015.353-12F5101.78
heart, embryo E13.CNhs11013.376-3I988.41
heart, embryo E14.CNhs10597.403-26D4109.14
heart, embryo E15.CNhs11017.431-16C8100.94
heart, embryo E16.CNhs11021.457-17C692.71
heart, embryo E17.CNhs11025.479-18E586.74
heart, embryo E18.CNhs11030.1283-20G382.90
heart, neonate N00.CNhs11213.639-21E380.10
heart, neonate N03.CNhs11221.1349-25I278.50
heart, neonate N10.CNhs11118.749-24G181.10
heart, neonate N16.CNhs11209.782-15G169.72
heart, neonate N20.CNhs11127.821-26I669.59
heart, neonate N25.CNhs11196.1351-25D370.26
heart, neonate N30.CNhs11202.1390-42D273.14
hippocampus, adult.CNhs10478.13-16E8525.30
hippocampus, neonate N00.CNhs11228.627-43G1252.12
intestinal mucosa, adult.CNhs10506.860-29I348.24
intestine, adult.CNhs10496.178-9A362.67
intestine, embryo E12.CNhs11019.1251-16I573.58
intestine, embryo E13.CNhs11010.381-16D572.69
intestine, embryo E15.CNhs10602.976-16D873.20
intestine, embryo E16.CNhs10585.463-22H488.74
intestine, embryo E17.CNhs10582.482-18D384.06
intestine, embryo E18.CNhs10526.1289-20F789.79
intestine, neonate N00.CNhs11126.644-26D159.79
intestine, neonate N01.CNhs11192.1322-23E975.10
intestine, neonate N06.CNhs11102.688-20B869.87
intestine, neonate N07.CNhs11095.720-20F280.58
intestine, neonate N10.CNhs11098.755-23A568.43
intestine, neonate N20.CNhs11187.827-18D165.61
intestine, neonate N25.CNhs11121.1352-25E358.14
intestine, neonate N30.CNhs11131.1384-42G154.96
kidney, embryo E14.CNhs10606.411-4I988.57
kidney, embryo E15.CNhs10997.434-16F873.58
kidney, embryo E16.CNhs10584.464-22A599.18
kidney, embryo E17.CNhs11028.483-18I282.89
kidney, embryo E18.CNhs11001.1288-20C780.88
kidney, neonate N00.CNhs11214.646-21G789.07
kidney, neonate N10.CNhs11206.758-6D5119.14
kidney, neonate N20.CNhs11113.832-19I1137.13
kidney, neonate N25.CNhs11122.1353-25F3137.53
kidney, neonate N30.CNhs11203.1385-42H1143.26
liver, adult pregnant day01.CNhs10466.508-5B282.41
liver, embryo E12.CNhs10601.355-15F8104.61
liver, embryo E13.CNhs10524.378-3H6116.17
liver, embryo E14.CNhs10594.409-16E1112.88
liver, embryo E15.CNhs10520.433-16D7119.89
liver, embryo E16.CNhs10523.462-17F5111.67
liver, embryo E17.CNhs10510.481-18A399.05
liver, embryo E18.CNhs10579.499-43G4111.05
liver, neonate N00.CNhs11117.641-24F487.23
liver, neonate N03.CNhs11123.1345-25G286.76
liver, neonate N06.CNhs11101.684-20A8100.64
liver, neonate N07.CNhs11103.716-20H2103.83
liver, neonate N10.CNhs11115.751-24B986.43
liver, neonate N20.CNhs11220.823-25A388.66
liver, neonate N25.CNhs11198.1368-26H196.52
liver, neonate N30.CNhs11106.1382-42D191.66
lung, adult.CNhs10474.28-22B1118.80
lung, embryo E12.CNhs10522.354-16G270.87
lung, embryo E14.CNhs10604.404-26F879.85
lung, embryo E15.CNhs11020.432-17C571.29
lung, embryo E16.CNhs10998.458-17B677.45
lung, embryo E17.CNhs10605.480-44A685.60
lung, embryo E18.CNhs10583.1287-20I692.60
lung, neonate N00.CNhs11224.640-42C671.61
lung, neonate N06.CNhs11212.683-20E586.23
lung, neonate N07.CNhs11111.715-19A387.92
lung, neonate N10.CNhs11219.750-23E680.84
lung, neonate N20.CNhs11109.822-18A491.11
lung, neonate N25.CNhs11119.1359-25C783.06
lung, neonate N30.CNhs11133.1394-42H297.64
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A191.98
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1112.04
mammary gland, adult lactating day02.CNhs10480.595-22B6193.76
mammary gland, adult pregnant day19.CNhs10476.588-5H2109.00
medulla oblongata, adult.CNhs10477.17-12C2678.49
medulla oblongata, neonate N30.CNhs11200.1396-42A3589.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C716.23
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C246.96
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E182.98
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E290.97
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3114.39
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D763.57
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D859.49
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D961.99
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D479.34
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D597.61
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D699.61
olfactory brain, adult.CNhs10489.18-22I9349.60
ovary, adult.CNhs10507.91-2I769.69
ovary, embryo E18.CNhs11040.505-44H782.80
ovary, neonate N00.CNhs11217.1299-22I466.29
oviduct, adult pregnant day01.CNhs10500.988-6G672.42
pancreas, adult.CNhs10486.34-16E4100.89
pancreas, embryo E14.CNhs11012.405-44F491.04
pancreas, embryo E15.CNhs11042.1556-45F291.30
pancreas, embryo E16.CNhs11003.460-26E593.36
pancreas, embryo E17.CNhs10599.1558-45G3101.29
pancreas, embryo E18.CNhs10580.1535-43I781.16
pancreas, neonate N00.CNhs11105.645-26G959.70
pancreas, neonate N01.CNhs11138.1531-43D776.34
pancreas, neonate N02.CNhs11139.1539-43D874.51
pancreas, neonate N16.CNhs11136.787-43B671.74
pancreas, neonate N25.CNhs11094.1555-45E284.33
pancreas, neonate N30.CNhs11182.1548-44H585.60
pituitary gland, adult.CNhs10493.21-1G8124.26
pituitary gland, embryo E12.CNhs11018.346-16E690.21
pituitary gland, embryo E13.CNhs11009.370-44C7103.10
pituitary gland, embryo E14.CNhs11037.398-44A5109.74
pituitary gland, embryo E15.CNhs10592.427-16B9118.46
pituitary gland, embryo E16.CNhs11036.449-43F6117.72
pituitary gland, embryo E17.CNhs11039.1265-44F5125.55
pituitary gland, neonate N00.CNhs11190.1308-22E9111.43
placenta, adult pregnant day10.CNhs10472.539-13I752.57
placenta, adult pregnant day17.CNhs10464.577-18G381.34
prostate, adult.CNhs10470.859-1F8128.57
skin, adult.CNhs10492.30-1C345.01
skin, neonate N00.CNhs11124.650-25G456.19
skin, neonate N03.CNhs11215.662-22H365.50
skin, neonate N06.CNhs11097.693-20I587.38
skin, neonate N10.CNhs11108.762-6C484.53
small intestine, neonate N16.CNhs11114.790-21I159.46
spinal cord, adult.CNhs10505.24-13C9690.15
spleen, adult.CNhs10465.25-2G2104.57
spleen, embryo E16.CNhs11035.461-43C169.76
spleen, embryo E18.CNhs11011.1271-21F282.60
spleen, neonate N10.CNhs11116.752-24D196.07
spleen, neonate N20.CNhs11112.824-19H1106.07
spleen, neonate N25.CNhs11099.1354-25G387.39
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C689.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9102.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D391.63
stomach, adult.CNhs10503.33-1H682.10
stomach, embryo E12.CNhs10588.356-43E387.15
stomach, embryo E15.CNhs10603.1252-16G874.21
stomach, embryo E16.CNhs11022.459-17D459.08
stomach, embryo E17.CNhs11006.1035-18D556.24
stomach, embryo E18.CNhs10999.1286-20C662.45
stomach, neonate N03.CNhs11193.1340-24B863.25
stomach, neonate N07.CNhs11210.718-18A971.41
stomach, neonate N25.CNhs11104.1355-25E465.96
stomach, neonate N30.CNhs11134.1386-42I151.33
submandibular gland, adult.CNhs10469.59-29C1112.46
testis, adult.CNhs10504.57-7G584.55
testis, embryo E13.CNhs11031.389-23F564.14
testis, embryo E15.CNhs11034.443-27C559.73
testis, embryo E16.CNhs11033.470-26G565.72
testis, embryo E17.CNhs11029.486-18I568.58
testis, embryo E18.CNhs11027.503-18G581.77
testis, neonate N00.CNhs11189.1300-22B778.51
testis, neonate N07.CNhs11222.726-26I464.06
testis, neonate N10.CNhs11204.763-44D962.08
testis, neonate N20.CNhs11110.839-18H395.67
testis, neonate N30.CNhs11130.1391-42E276.33
thymus, adult.CNhs10471.38-12B5151.69
thymus, embryo E14.CNhs11041.402-44I4103.59
thymus, embryo E15.CNhs11005.430-45I286.38
thymus, embryo E16.CNhs11002.456-26C5102.51
thymus, embryo E17.CNhs10581.478-18C1148.06
thymus, embryo E18.CNhs10595.1273-19G4122.19
thymus, neonate N02.CNhs11181.1541-43F8105.17
thymus, neonate N03.CNhs11137.2104-43C7120.81
thymus, neonate N06.CNhs11197.681-26C4105.71
thymus, neonate N07.CNhs11211.713-19D3127.65
thymus, neonate N10.CNhs11194.748-24E4113.43
thymus, neonate N20.CNhs11186.820-7A2125.92
thymus, neonate N25.CNhs11125.1362-25G7112.38
thymus, neonate N30.CNhs11132.1393-42G2117.70
tongue, adult.CNhs10499.32-1B437.41
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H362.60
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F731.67
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G543.15
urinary bladder, adult.CNhs10481.879-12E474.38
uterus, adult pregnant day19.CNhs10497.590-15F538.29
uterus, adult.CNhs10509.92-27E540.84
vagina, adult.CNhs10502.89-27D525.51
vesicular gland, adult.CNhs10491.51-27F8102.32
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1939.75
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2808.33
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3881.69
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7692.74
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4672.07
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5648.13
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6650.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7608.38
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8624.88
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9665.84
whole body, embryo E11.CNhs11014.324-5I842.14
whole body, embryo E12.CNhs10587.857-27C9114.92
whole body, embryo E13.CNhs10512.372-23H293.90
whole body, embryo E14.5.CNhs10578.420-27D293.11
whole body, embryo E14.CNhs10519.395-14B161.63
whole body, embryo E16.CNhs10514.453-14F266.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G590.68
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G596.22
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5101.41
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G589.96
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5107.98
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G595.63
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G576.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G581.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G583.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G590.50
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G576.02
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G573.69
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G576.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G589.94
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G583.32
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G577.91
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G572.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G593.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G590.06
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G586.39
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G584.15
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G592.34
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G577.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5112.23
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G582.45
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G578.41
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G575.30
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G578.24
whole body, embryo E17.5.CNhs10513.490-9F986.04
whole body, embryo E17.CNhs10517.475-3I5150.14
whole body, embryo E18.CNhs10516.493-3B389.60
whole body, neonate N00.CNhs10525.657-19C2117.75
whole body, neonate N01.CNhs10576.659-23C688.18
whole body, neonate N06.CNhs10515.692-21D186.91
whole body, neonate N10.CNhs10518.761-6B474.89





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)8.02e-1323
neuroblast (sensu Vertebrata)8.02e-1323
ectodermal cell9.23e-0944
neurectodermal cell9.23e-0944
neural cell1.27e-0843
neuron1.80e-0833
neuronal stem cell1.80e-0833
neuroblast1.80e-0833
electrically signaling cell1.80e-0833

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.68e-2654
central nervous system4.32e-2673
neurectoderm5.42e-2564
neural plate5.42e-2564
presumptive neural plate5.42e-2564
neural tube1.11e-2452
neural rod1.11e-2452
future spinal cord1.11e-2452
neural keel1.11e-2452
nervous system6.87e-2475
ectoderm-derived structure3.53e-2295
ectoderm3.53e-2295
presumptive ectoderm3.53e-2295
ecto-epithelium1.09e-2173
brain1.67e-2147
future brain1.67e-2147
regional part of brain5.78e-2146
pre-chordal neural plate7.89e-1949
gray matter1.92e-1834
anterior neural tube2.74e-1840
regional part of forebrain1.27e-1739
forebrain1.27e-1739
future forebrain1.27e-1739
brain grey matter1.22e-1529
regional part of telencephalon1.22e-1529
telencephalon1.22e-1529
tube8.20e-14114
structure with developmental contribution from neural crest1.41e-1392
anatomical conduit7.63e-13122
cerebral cortex2.29e-1121
cerebral hemisphere2.29e-1121
pallium2.29e-1121
regional part of cerebral cortex1.19e-0917
epithelium5.40e-09174
cell layer6.67e-09176
occipital lobe6.22e-0810
visual cortex6.22e-0810
neocortex6.22e-0810
posterior neural tube5.57e-0712
chordal neural plate5.57e-0712
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE2:Mm9::chr19:7557731..7557769,-&oldid=3782413"