Personal tools

UBERON:0006555

From FANTOM5_SSTAR

Revision as of 17:57, 12 September 2014 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Name:excretory tube
Namespace:FANTOM

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000025(tube),UBERON:0006554(urinary system structure)
part_of:UBERON:0001008(renal system)



Children

is a:UBERON:0000056 (ureter),UBERON:0000083 (mesonephric tubule),UBERON:0006553 (renal duct),UBERON:0007684 (uriniferous tubule),UBERON:0009773 (renal tubule),UBERON:0010532 (primitive nephron)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006555 (excretory tube), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
7.12e-98FFCP PHASE2:Hg19::chr2:693380..693398,+#_e3592ada75472de93964bc8b01718aa4p@chr2:693380..693398, +
7.12e-98FFCP PHASE1:Hg19::chr2:693380..693398,+#_e3592ada75472de93964bc8b01718aa4p@chr2:693380..693398, +
1.58e-86FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_3b2bf352079d1a022ce1c9522b9b5110p4@Spink12
1.58e-86FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_3b2bf352079d1a022ce1c9522b9b5110p4@Spink12
2.81e-78FFCP PHASE1:Hg19::chr15:66420804..66420837,-#_625bd56ad734e385381b843cd2fe98cap4@MEGF11
2.81e-78FFCP PHASE2:Hg19::chr15:66420804..66420837,-#_625bd56ad734e385381b843cd2fe98cap4@MEGF11
1.04e-71FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_15c0338b883399fdbd8f506c24c999cdp4@PAX2
1.04e-71FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_15c0338b883399fdbd8f506c24c999cdp4@PAX2
1.28e-69FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_5ac4ac0a461e2936ec059f1e2e5ba1e5p7@HOXA10
1.28e-69FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_5ac4ac0a461e2936ec059f1e2e5ba1e5p7@HOXA10
4.01e-67FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_e980f55b99064a2466be6bc8d5320394p3@PAX2
4.01e-67FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_e980f55b99064a2466be6bc8d5320394p3@PAX2
1.1e-61FFCP PHASE1:Hg19::chr1:1100457..1100470,+#_87bca8656149280ac9f661fa29378448p@chr1:1100457..1100470, +
1.1e-61FFCP PHASE2:Hg19::chr1:1100457..1100470,+#_87bca8656149280ac9f661fa29378448p@chr1:1100457..1100470, +
3.28e-58FFCP PHASE2:Mm9::chr6:83487114..83487124,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr6:83487114..83487124, -
3.28e-58FFCP PHASE1:Mm9::chr11:53937918..53937922,+#_84c76bf0c1e0476c0a3dd256f65943d6p7@P4ha2
3.28e-58FFCP PHASE2:Mm9::chrX:12571679..12571688,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chrX:12571679..12571688, -
3.28e-58FFCP PHASE2:Mm9::chr13:21385729..21385768,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr13:21385729..21385768, +
3.28e-58FFCP PHASE2:Mm9::chr15:54678902..54678911,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr15:54678902..54678911, -
3.28e-58FFCP PHASE2:Mm9::chr5:31379437..31379448,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr5:31379437..31379448, +
3.28e-58FFCP PHASE1:Mm9::chr18:62816857..62816866,+#_84c76bf0c1e0476c0a3dd256f65943d6p7@Spink10
3.28e-58FFCP PHASE1:Mm9::chr7:109379339..109379349,+#_84c76bf0c1e0476c0a3dd256f65943d6p15@Pgap2
3.28e-58FFCP PHASE1:Mm9::chr5:35930667..35930691,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr5:35930667..35930691, +
3.28e-58FFCP PHASE2:Mm9::chr5:110773718..110773729,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr5:110773718..110773729, +
3.28e-58FFCP PHASE2:Mm9::chr11:116901496..116901514,-#_84c76bf0c1e0476c0a3dd256f65943d6p1@ENSMUST00000150628, p1@ENSMUST00000152401, p1@uc007mmw.1
3.28e-58FFCP PHASE1:Mm9::chr1:87936238..87936249,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr1:87936238..87936249, +
3.28e-58FFCP PHASE2:Mm9::chr5:100634942..100634968,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr5:100634942..100634968, +
3.28e-58FFCP PHASE2:Mm9::chr2:152302813..152302821,+#_84c76bf0c1e0476c0a3dd256f65943d6p3@Defb20
3.28e-58FFCP PHASE1:Mm9::chrX:130496286..130496293,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chrX:130496286..130496293, -
3.28e-58FFCP PHASE1:Mm9::chr5:110773795..110773801,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr5:110773795..110773801, +
3.28e-58FFCP PHASE1:Mm9::chr14:69116075..69116107,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr14:69116075..69116107, -
3.28e-58FFCP PHASE1:Mm9::chr11:17224952..17224968,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr11:17224952..17224968, +
3.28e-58FFCP PHASE2:Mm9::chr13:21379430..21379437,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr13:21379430..21379437, -
3.28e-58FFCP PHASE2:Mm9::chr7:151927980..151927988,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr7:151927980..151927988, +
3.28e-58FFCP PHASE2:Mm9::chr12:103896072..103896081,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr12:103896072..103896081, -
3.28e-58FFCP PHASE1:Mm9::chr14:51627586..51627595,+#_84c76bf0c1e0476c0a3dd256f65943d6p4@Rnase10
3.28e-58FFCP PHASE2:Mm9::chr15:75304900..75304907,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr15:75304900..75304907, +
3.28e-58FFCP PHASE2:Mm9::chr9:26785438..26785446,-#_84c76bf0c1e0476c0a3dd256f65943d6p3@Acad8
3.28e-58FFCP PHASE1:Mm9::chrX:20219008..20219045,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chrX:20219008..20219045, +
3.28e-58FFCP PHASE2:Mm9::chr2:164464249..164464258,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr2:164464249..164464258, -
3.28e-58FFCP PHASE2:Mm9::chr2:158083961..158083968,+#_84c76bf0c1e0476c0a3dd256f65943d6p4@Bpi
3.28e-58FFCP PHASE1:Mm9::chr5:31379454..31379466,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr5:31379454..31379466, +
3.28e-58FFCP PHASE1:Mm9::chr15:75304916..75304925,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr15:75304916..75304925, +
3.28e-58FFCP PHASE2:Mm9::chr13:24270118..24270122,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr13:24270118..24270122, -
3.28e-58FFCP PHASE2:Mm9::chr14:69116075..69116107,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr14:69116075..69116107, -
3.28e-58FFCP PHASE2:Mm9::chrX:75798097..75798101,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chrX:75798097..75798101, -
3.28e-58FFCP PHASE2:Mm9::chr8:22061771..22061777,-#_84c76bf0c1e0476c0a3dd256f65943d6p3@Gm6040, p3@LOC100503992
3.28e-58FFCP PHASE2:Mm9::chr3:107731917..107731926,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr3:107731917..107731926, -
3.28e-58FFCP PHASE2:Mm9::chr3:103650817..103650825,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr3:103650817..103650825, +
3.28e-58FFCP PHASE2:Mm9::chr11:101958844..101958851,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr11:101958844..101958851, -
3.28e-58FFCP PHASE2:Mm9::chr1:155738967..155738974,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr1:155738967..155738974, +
3.28e-58FFCP PHASE1:Mm9::chr2:25348986..25348999,-#_84c76bf0c1e0476c0a3dd256f65943d6p4@Lcn12
3.28e-58FFCP PHASE1:Mm9::chr13:24270118..24270122,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr13:24270118..24270122, -
3.28e-58FFCP PHASE2:Mm9::chr10:85390145..85390153,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr10:85390145..85390153, +
3.28e-58FFCP PHASE1:Mm9::chr1:155698178..155698191,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr1:155698178..155698191, -
3.28e-58FFCP PHASE1:Mm9::chr18:44261480..44261486,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr18:44261480..44261486, +
3.28e-58FFCP PHASE2:Mm9::chr9:26719400..26719404,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr9:26719400..26719404, -
3.28e-58FFCP PHASE1:Mm9::chr9:35657557..35657582,-#_84c76bf0c1e0476c0a3dd256f65943d6p2@Gm3428
3.28e-58FFCP PHASE2:Mm9::chr14:52542831..52542836,-#_84c76bf0c1e0476c0a3dd256f65943d6p4@Rnase13
3.28e-58FFCP PHASE1:Mm9::chr2:164464249..164464258,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr2:164464249..164464258, -
3.28e-58FFCP PHASE1:Mm9::chr15:54678915..54678922,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr15:54678915..54678922, -
3.28e-58FFCP PHASE2:Mm9::chr18:62775330..62775347,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr18:62775330..62775347, -
3.28e-58FFCP PHASE1:Mm9::chr1:192816674..192816714,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr1:192816674..192816714, +
3.28e-58FFCP PHASE2:Mm9::chr8:19141482..19141496,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr8:19141482..19141496, +
3.28e-58FFCP PHASE2:Mm9::chr10:91753336..91753348,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr10:91753336..91753348, -
3.28e-58FFCP PHASE1:Mm9::chr13:21383212..21383225,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr13:21383212..21383225, -
3.28e-58FFCP PHASE2:Mm9::chr1:90368977..90368987,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr1:90368977..90368987, +
3.28e-58FFCP PHASE1:Mm9::chr1:90156002..90156013,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr1:90156002..90156013, +
3.28e-58FFCP PHASE1:Mm9::chr16:23308115..23308126,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr16:23308115..23308126, +
3.28e-58FFCP PHASE2:Mm9::chr1:87922778..87922788,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr1:87922778..87922788, +
3.28e-58FFCP PHASE2:Mm9::chr7:65995799..65995810,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr7:65995799..65995810, -
3.28e-58FFCP PHASE2:Mm9::chr11:98567868..98567884,-#_84c76bf0c1e0476c0a3dd256f65943d6p5@Med24
3.28e-58FFCP PHASE2:Mm9::chrX:130496166..130496188,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chrX:130496166..130496188, -
3.28e-58FFCP PHASE2:Mm9::chr14:63611214..63611229,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr14:63611214..63611229, +
3.28e-58FFCP PHASE2:Mm9::chr5:31379845..31379855,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr5:31379845..31379855, +
3.28e-58FFCP PHASE2:Mm9::chr11:17224952..17224968,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr11:17224952..17224968, +
3.28e-58FFCP PHASE2:Mm9::chr4:137325863..137325870,-#_84c76bf0c1e0476c0a3dd256f65943d6p15@Alpl
3.28e-58FFCP PHASE1:Mm9::chr2:167480413..167480463,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr2:167480413..167480463, -
3.28e-58FFCP PHASE1:Mm9::chr11:101958887..101958896,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr11:101958887..101958896, -
3.28e-58FFCP PHASE2:Mm9::chr5:35930706..35930717,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr5:35930706..35930717, +
3.28e-58FFCP PHASE1:Mm9::chr1:89597818..89597827,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr1:89597818..89597827, +
3.28e-58FFCP PHASE1:Mm9::chr8:22061721..22061728,-#_84c76bf0c1e0476c0a3dd256f65943d6p2@Gm6040, p2@LOC100503992
3.28e-58FFCP PHASE2:Mm9::chr11:53955299..53955306,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr11:53955299..53955306, +
3.28e-58FFCP PHASE2:Mm9::chr6:147624258..147624285,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr6:147624258..147624285, -
3.28e-58FFCP PHASE1:Mm9::chr16:43230846..43230884,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr16:43230846..43230884, +
3.28e-58FFCP PHASE1:Mm9::chr11:34107586..34107593,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr11:34107586..34107593, -
3.28e-58FFCP PHASE1:Mm9::chr10:56515486..56515496,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr10:56515486..56515496, +
3.28e-58FFCP PHASE2:Mm9::chrX:50280199..50280211,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chrX:50280199..50280211, +
3.28e-58FFCP PHASE2:Mm9::chr13:21381777..21381789,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr13:21381777..21381789, -
3.28e-58FFCP PHASE1:Mm9::chr13:21378774..21378782,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr13:21378774..21378782, -
3.28e-58FFCP PHASE2:Mm9::chr15:75347689..75347703,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr15:75347689..75347703, +
3.28e-58FFCP PHASE1:Mm9::chrX:50280152..50280179,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chrX:50280152..50280179, +
3.28e-58FFCP PHASE2:Mm9::chr2:164479326..164479336,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr2:164479326..164479336, +
3.28e-58FFCP PHASE2:Mm9::chr9:100350777..100350782,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr9:100350777..100350782, +
3.28e-58FFCP PHASE1:Mm9::chr5:31379878..31379883,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr5:31379878..31379883, +
3.28e-58FFCP PHASE1:Mm9::chr11:96140694..96140720,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr11:96140694..96140720, +
3.28e-58FFCP PHASE1:Mm9::chr9:70761885..70761895,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr9:70761885..70761895, +
3.28e-58FFCP PHASE1:Mm9::chr5:75559819..75559830,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr5:75559819..75559830, +
3.28e-58FFCP PHASE1:Mm9::chr1:87922778..87922788,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr1:87922778..87922788, +
3.28e-58FFCP PHASE1:Mm9::chr10:116399500..116399516,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr10:116399500..116399516, +