Personal tools

UBERON:0002827

From FANTOM5_SSTAR

Revision as of 17:35, 12 September 2014 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Name:vestibulocochlear ganglion
Namespace:FANTOM
Xrefs:
links:

EFO:0003543
EHDAA2:0002196
EHDAA:5569
EHDAA:6653
EMAPA:17571
MA:0001084
NIF_GrossAnatomy:birnlex_2564
TAO:0000588
VHOG:0000696
XAO:0004142

ZFA:0000588
Synonyms: "auditory ganglion" EXACT [ZFA:0000588]
"gVIII" EXACT [ZFA:0000588]
"sag" EXACT [ZFA:0000588]
"statoacoustic (VIII) ganglion" EXACT [ZFA:0000588]
"statoacoustic ganglia" EXACT [ZFA:0000588]
"vestibulocochlear VIII ganglion" EXACT [MA:0001084]
Comments:Editor notes: Consider follow MA naming scheme. // The cell bodies of the cochlear nerve lie within the central aspect of the cochlea and are collectively known as the spiral ganglion. This name reflects the fact that the cell bodies, considered as a unit, have a spiral (or perhaps more accurately, a helical) shape, reflecting the shape of the cochlea. The terms "cochlear nerve fiber" and "spiral ganglion cell" are used, to some degree, interchangeably, although the former may be used to more specifically refer to the central axons of the cochlear nerve. These central axons exit the cochlea at its base, where it forms a nerve trunk. In humans, this aspect of the nerve is roughly one inch in length. It projects centrally to the brainstem, where its fibers synapse with the cell bodies of the cochlear nucleus[Wikipedia:Cochlear_nerve]
Alt_id: UBERON:NIF_GrossAnatomy_birnlex_2564-ZFA_0000588
Subset: vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0001714(cranial ganglion),UBERON:0010313(neural crest-derived structure)
develops_from:UBERON:0003249(epithelium of otic placode),UBERON:0005565(facio-acoustic neural crest),UBERON:0012175(acoustico-facial VII-VIII ganglion complex)
part_of:UBERON:0002105(vestibulo-auditory system)



Children

part of:UBERON:0000395 (cochlear ganglion)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002827 (vestibulocochlear ganglion), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results










Property "Property value" (as page type) with input value "UBPROP:0000001 "The sensory ganglion of the ear. (See Anatomical Atlas entry for statoacoustic ganglion by T. Whitfield.)[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.