UBERON:0001556
From FANTOM5_SSTAR
Name: | lower urinary tract | |
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Namespace: | FANTOM | |
Definition: | "Subdivision of urinary system which consists of the urinary bladder and the urethra." [FMA:45659] | |
Xrefs: |
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Alt_id: | UBERON:FMA_45659-MA_0002636 | |
Subset: | uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000477(anatomical cluster),UBERON:0006554(urinary system structure) |
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part_of: | UBERON:0001008(renal system) |
Children
part of: | UBERON:0000057 (urethra),UBERON:0001255 (urinary bladder),CL:1000600 (lower urinary tract cell) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10011-101C2 (bladder, adult, pool1)
- 10291-104G3
- 10319-105A4 (Urethra, donor2)
- 10347-105D5
- 10418-106C4 (transitional-cell carcinoma cell line:5637)
- 10565-108A7
- 10587-108D2
- 10751-110D4
- 11519-119H7 (Smooth Muscle Cells - Bladder, donor1)
- 11599-120H6
... further results Mouse (Mus musculus)
- 10011-101C2 (bladder, adult, pool1)
- 10291-104G3
- 10319-105A4 (Urethra, donor2)
- 10347-105D5
- 10418-106C4 (transitional-cell carcinoma cell line:5637)
- 10565-108A7
- 10587-108D2
- 10751-110D4
- 11519-119H7 (Smooth Muscle Cells - Bladder, donor1)
- 11599-120H6
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001556 (lower urinary tract), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data