Personal tools

UBERON:0001018

From FANTOM5_SSTAR

Revision as of 17:14, 12 September 2014 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Name:axon tract
Namespace:FANTOM
Definition:"A group of axons linking two or more neuropils and having a common origin, termination[FBbt]." [1]
Xrefs:
links:

EV:0100304
FBbt:00005100

FMA:83847
Synonyms: "neuraxis tract" EXACT [FMA:83847]
"tract" RELATED []
"tract of neuraxis" EXACT [FMA:83847]
Comments:WP says this is the analog of peripheral nerves in CNS
Alt_id: UBERON:FBbt_00005100-FMA_76739

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000122(neuron projection bundle),UBERON:0011215(central nervous system cell part cluster)
part_of:UBERON:0001017(central nervous system)



Children

is a:UBERON:0001020 (nervous system commissure),UBERON:0007702 (tract of brain)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001018 (axon tract), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE1:Hg19::chr15:93827399..93827403,+#_cc317cf28974c3ae0c387b4b40039415p@chr15:93827399..93827403, +
5.42e-195FFCP PHASE2:Hg19::chr15:93827399..93827403,+#_cc317cf28974c3ae0c387b4b40039415p@chr15:93827399..93827403, +
5.42e-195FFCP PHASE2:Hg19::chr17:73689469..73689476,-#_cc317cf28974c3ae0c387b4b40039415p@chr17:73689469..73689476, -
5.42e-195FFCP PHASE1:Hg19::chr14:36462819..36462832,+#_cc317cf28974c3ae0c387b4b40039415p@chr14:36462819..36462832, +
5.42e-195FFCP PHASE2:Hg19::chr14:36462819..36462832,+#_cc317cf28974c3ae0c387b4b40039415p@chr14:36462819..36462832, +
5.42e-195FFCP PHASE1:Hg19::chr17:73689469..73689476,-#_cc317cf28974c3ae0c387b4b40039415p@chr17:73689469..73689476, -
5.42e-195FFCP PHASE2:Hg19::chr5:60927228..60927236,-#_cc317cf28974c3ae0c387b4b40039415p3@BC032909, p3@BC032910
5.42e-195FFCP PHASE1:Hg19::chr5:60927228..60927236,-#_cc317cf28974c3ae0c387b4b40039415p3@BC032909, p3@BC032910
9.37e-99FFCP PHASE1:Hg19::chr11:110248322..110248329,-#_a87e1ec7656977919ad4853d849888d9p@chr11:110248322..110248329, -
9.37e-99FFCP PHASE1:Hg19::chr14:33926303..33926307,-#_a87e1ec7656977919ad4853d849888d9p@chr14:33926303..33926307, -
9.37e-99FFCP PHASE2:Hg19::chr14:33926303..33926307,-#_a87e1ec7656977919ad4853d849888d9p@chr14:33926303..33926307, -
9.37e-99FFCP PHASE1:Hg19::chr12:78359873..78359882,+#_a87e1ec7656977919ad4853d849888d9p41@NAV3
9.37e-99FFCP PHASE2:Hg19::chr12:78359873..78359882,+#_a87e1ec7656977919ad4853d849888d9p41@NAV3
9.37e-99FFCP PHASE2:Hg19::chr11:110248322..110248329,-#_a87e1ec7656977919ad4853d849888d9p@chr11:110248322..110248329, -
9.37e-99FFCP PHASE2:Hg19::chr2:232548018..232548022,-#_a87e1ec7656977919ad4853d849888d9p@chr2:232548018..232548022, -
9.37e-99FFCP PHASE1:Hg19::chr2:232548018..232548022,-#_a87e1ec7656977919ad4853d849888d9p@chr2:232548018..232548022, -
2.55e-98FFCP PHASE1:Hg19::chr19:35788742..35788752,+#_cb686db587ca8ff92077d9b0395def95p@chr19:35788742..35788752, +
2.55e-98FFCP PHASE2:Hg19::chr3:15374659..15374696,-#_cb686db587ca8ff92077d9b0395def95p10@SH3BP5
2.55e-98FFCP PHASE1:Hg19::chr3:15374659..15374696,-#_cb686db587ca8ff92077d9b0395def95p10@SH3BP5
2.55e-98FFCP PHASE2:Hg19::chr19:35788742..35788752,+#_cb686db587ca8ff92077d9b0395def95p@chr19:35788742..35788752, +
1.23e-66FFCP PHASE1:Hg19::chr17:72823919..72823924,-#_74afa17c7aa64beae4375bc0c3820ffcp@chr17:72823919..72823924, -
1.23e-66FFCP PHASE2:Hg19::chr8:42037488..42037504,+#_74afa17c7aa64beae4375bc0c3820ffcp@chr8:42037488..42037504, +
1.23e-66FFCP PHASE1:Hg19::chr8:42037488..42037504,+#_74afa17c7aa64beae4375bc0c3820ffcp@chr8:42037488..42037504, +
1.23e-66FFCP PHASE1:Hg19::chr10:73479518..73479527,-#_74afa17c7aa64beae4375bc0c3820ffcp5@C10orf105
1.23e-66FFCP PHASE2:Hg19::chr7:124391226..124391235,-#_74afa17c7aa64beae4375bc0c3820ffcp@chr7:124391226..124391235, -
1.23e-66FFCP PHASE2:Hg19::chr17:72823919..72823924,-#_74afa17c7aa64beae4375bc0c3820ffcp@chr17:72823919..72823924, -
1.23e-66FFCP PHASE1:Hg19::chr7:124391226..124391235,-#_74afa17c7aa64beae4375bc0c3820ffcp@chr7:124391226..124391235, -
1.23e-66FFCP PHASE2:Hg19::chr10:73479518..73479527,-#_74afa17c7aa64beae4375bc0c3820ffcp5@C10orf105
1.23e-66FFCP PHASE1:Hg19::chr12:78359680..78359686,+#_74afa17c7aa64beae4375bc0c3820ffcp32@NAV3
1.23e-66FFCP PHASE2:Hg19::chr12:78359680..78359686,+#_74afa17c7aa64beae4375bc0c3820ffcp32@NAV3
2.39e-66FFCP PHASE1:Hg19::chr10:61043452..61043467,-#_7a21c13cd9ccb88dd155572b2cf4e204p16@FAM13C
2.39e-66FFCP PHASE1:Hg19::chr10:25012236..25012245,-#_7a21c13cd9ccb88dd155572b2cf4e204p24@ARHGAP21
2.39e-66FFCP PHASE2:Hg19::chr6:163681762..163681767,+#_7a21c13cd9ccb88dd155572b2cf4e204p@chr6:163681762..163681767, +
2.39e-66FFCP PHASE2:Hg19::chr10:61043452..61043467,-#_7a21c13cd9ccb88dd155572b2cf4e204p16@FAM13C
2.39e-66FFCP PHASE1:Hg19::chr6:163681762..163681767,+#_7a21c13cd9ccb88dd155572b2cf4e204p@chr6:163681762..163681767, +
2.39e-66FFCP PHASE2:Hg19::chr10:25012236..25012245,-#_7a21c13cd9ccb88dd155572b2cf4e204p24@ARHGAP21
4.66e-66FFCP PHASE1:Hg19::chr8:101522298..101522305,-#_a8a826119d797967142bccf6815b4c8cp@chr8:101522298..101522305, -
4.66e-66FFCP PHASE2:Hg19::chr17:40120071..40120085,+#_a8a826119d797967142bccf6815b4c8cp15@CNP
4.66e-66FFCP PHASE2:Hg19::chr7:129015806..129015815,+#_a8a826119d797967142bccf6815b4c8cp@chr7:129015806..129015815, +
4.66e-66FFCP PHASE1:Hg19::chr5:35089799..35089804,-#_a8a826119d797967142bccf6815b4c8cp20@PRLR
4.66e-66FFCP PHASE2:Hg19::chr5:35089832..35089839,-#_a8a826119d797967142bccf6815b4c8cp26@PRLR
4.66e-66FFCP PHASE2:Hg19::chr7:129012882..129012891,-#_a8a826119d797967142bccf6815b4c8cp@chr7:129012882..129012891, -
4.66e-66FFCP PHASE1:Hg19::chr7:129015806..129015815,+#_a8a826119d797967142bccf6815b4c8cp@chr7:129015806..129015815, +
4.66e-66FFCP PHASE1:Hg19::chr5:35089832..35089839,-#_a8a826119d797967142bccf6815b4c8cp26@PRLR
4.66e-66FFCP PHASE1:Hg19::chr17:40120071..40120085,+#_a8a826119d797967142bccf6815b4c8cp15@CNP
4.66e-66FFCP PHASE1:Hg19::chr7:129012882..129012891,-#_a8a826119d797967142bccf6815b4c8cp@chr7:129012882..129012891, -
4.66e-66FFCP PHASE2:Hg19::chr4:174293011..174293022,-#_a8a826119d797967142bccf6815b4c8cp@chr4:174293011..174293022, -
4.66e-66FFCP PHASE2:Hg19::chr13:99135698..99135706,+#_a8a826119d797967142bccf6815b4c8cp@chr13:99135698..99135706, +
4.66e-66FFCP PHASE2:Hg19::chr4:645709..645712,+#_a8a826119d797967142bccf6815b4c8cp15@PDE6B
4.66e-66FFCP PHASE1:Hg19::chr13:99135698..99135706,+#_a8a826119d797967142bccf6815b4c8cp@chr13:99135698..99135706, +
4.66e-66FFCP PHASE2:Hg19::chr14:91199850..91199861,-#_a8a826119d797967142bccf6815b4c8cp@chr14:91199850..91199861, -
4.66e-66FFCP PHASE1:Hg19::chr14:91199850..91199861,-#_a8a826119d797967142bccf6815b4c8cp@chr14:91199850..91199861, -
4.66e-66FFCP PHASE1:Hg19::chr4:174293011..174293022,-#_a8a826119d797967142bccf6815b4c8cp@chr4:174293011..174293022, -
4.66e-66FFCP PHASE2:Hg19::chr8:101522298..101522305,-#_a8a826119d797967142bccf6815b4c8cp@chr8:101522298..101522305, -
4.66e-66FFCP PHASE1:Hg19::chr4:645709..645712,+#_a8a826119d797967142bccf6815b4c8cp15@PDE6B
4.66e-66FFCP PHASE2:Hg19::chr5:35089799..35089804,-#_a8a826119d797967142bccf6815b4c8cp20@PRLR
1.46e-50FFCP PHASE2:Hg19::chr6:170571770..170571782,-#_a5f93d5a5e3dc8e0aad789a857acc96dp2@LOC154449
1.46e-50FFCP PHASE1:Hg19::chr6:170571770..170571782,-#_a5f93d5a5e3dc8e0aad789a857acc96dp2@LOC154449
2.42e-50FFCP PHASE1:Hg19::chr4:74005833..74005844,-#_917685e40783abe2482418f34226cdb8p@chr4:74005833..74005844, -
2.42e-50FFCP PHASE1:Hg19::chr11:133996343..133996351,+#_917685e40783abe2482418f34226cdb8p8@JAM3
2.42e-50FFCP PHASE2:Hg19::chr10:7454514..7454525,-#_917685e40783abe2482418f34226cdb8p@chr10:7454514..7454525, -
2.42e-50FFCP PHASE2:Hg19::chrX:103031196..103031205,-#_917685e40783abe2482418f34226cdb8p@chrX:103031196..103031205, -
2.42e-50FFCP PHASE2:Hg19::chr12:106697974..106697990,-#_917685e40783abe2482418f34226cdb8p31@CKAP4
2.42e-50FFCP PHASE2:Hg19::chr19:15751984..15751994,+#_917685e40783abe2482418f34226cdb8p6@CYP4F3
2.42e-50FFCP PHASE1:Hg19::chr12:106697974..106697990,-#_917685e40783abe2482418f34226cdb8p31@CKAP4
2.42e-50FFCP PHASE1:Hg19::chrX:103031196..103031205,-#_917685e40783abe2482418f34226cdb8p@chrX:103031196..103031205, -
2.42e-50FFCP PHASE1:Hg19::chr10:7454514..7454525,-#_917685e40783abe2482418f34226cdb8p@chr10:7454514..7454525, -
2.42e-50FFCP PHASE2:Hg19::chr7:30202318..30202329,+#_917685e40783abe2482418f34226cdb8p@chr7:30202318..30202329, +
2.42e-50FFCP PHASE1:Hg19::chr19:15751984..15751994,+#_917685e40783abe2482418f34226cdb8p6@CYP4F3
2.42e-50FFCP PHASE2:Hg19::chr11:133996343..133996351,+#_917685e40783abe2482418f34226cdb8p8@JAM3
2.42e-50FFCP PHASE2:Hg19::chr4:74005833..74005844,-#_917685e40783abe2482418f34226cdb8p@chr4:74005833..74005844, -
2.42e-50FFCP PHASE1:Hg19::chr7:30202318..30202329,+#_917685e40783abe2482418f34226cdb8p@chr7:30202318..30202329, +
3.99e-50FFCP PHASE1:Hg19::chr9:20927844..20927855,+#_541dcefadcb2f73ee7a3af2b7b5172e2p@chr9:20927844..20927855, +
3.99e-50FFCP PHASE2:Hg19::chr17:36726052..36726061,-#_541dcefadcb2f73ee7a3af2b7b5172e2p@chr17:36726052..36726061, -
3.99e-50FFCP PHASE1:Hg19::chr17:36726052..36726061,-#_541dcefadcb2f73ee7a3af2b7b5172e2p@chr17:36726052..36726061, -
3.99e-50FFCP PHASE2:Hg19::chr11:45922629..45922637,+#_541dcefadcb2f73ee7a3af2b7b5172e2p@chr11:45922629..45922637, +
3.99e-50FFCP PHASE2:Hg19::chr3:160203278..160203289,-#_541dcefadcb2f73ee7a3af2b7b5172e2p8@TRIM59
3.99e-50FFCP PHASE2:Hg19::chr6:164364681..164364684,-#_541dcefadcb2f73ee7a3af2b7b5172e2p@chr6:164364681..164364684, -
3.99e-50FFCP PHASE1:Hg19::chr11:45922629..45922637,+#_541dcefadcb2f73ee7a3af2b7b5172e2p@chr11:45922629..45922637, +
3.99e-50FFCP PHASE1:Hg19::chr6:164364681..164364684,-#_541dcefadcb2f73ee7a3af2b7b5172e2p@chr6:164364681..164364684, -
3.99e-50FFCP PHASE1:Hg19::chr3:160203278..160203289,-#_541dcefadcb2f73ee7a3af2b7b5172e2p8@TRIM59
3.99e-50FFCP PHASE2:Hg19::chr9:20927844..20927855,+#_541dcefadcb2f73ee7a3af2b7b5172e2p@chr9:20927844..20927855, +
6.58e-50FFCP PHASE1:Hg19::chr12:99288459..99288464,-#_c0fcd87985601dd79d13a6542a384021p38@ANKS1B
6.58e-50FFCP PHASE2:Hg19::chr12:99288459..99288464,-#_c0fcd87985601dd79d13a6542a384021p38@ANKS1B
6.58e-50FFCP PHASE2:Hg19::chr4:7412700..7412704,+#_c0fcd87985601dd79d13a6542a384021p@chr4:7412700..7412704, +
6.58e-50FFCP PHASE1:Hg19::chr6:133119649..133119655,-#_c0fcd87985601dd79d13a6542a384021p6@C6orf192
6.58e-50FFCP PHASE2:Hg19::chr3:190578500..190578506,-#_c0fcd87985601dd79d13a6542a384021p@chr3:190578500..190578506, -
6.58e-50FFCP PHASE1:Hg19::chr4:7412700..7412704,+#_c0fcd87985601dd79d13a6542a384021p@chr4:7412700..7412704, +
6.58e-50FFCP PHASE1:Hg19::chr11:117585539..117585541,-#_c0fcd87985601dd79d13a6542a384021p@chr11:117585539..117585541, -
6.58e-50FFCP PHASE2:Hg19::chr3:10706167..10706179,-#_c0fcd87985601dd79d13a6542a384021p@chr3:10706167..10706179, -
6.58e-50FFCP PHASE2:Hg19::chrX:28605300..28605301,+#_c0fcd87985601dd79d13a6542a384021p8@IL1RAPL1
6.58e-50FFCP PHASE1:Hg19::chr3:190578500..190578506,-#_c0fcd87985601dd79d13a6542a384021p@chr3:190578500..190578506, -
6.58e-50FFCP PHASE1:Hg19::chr3:10706167..10706179,-#_c0fcd87985601dd79d13a6542a384021p@chr3:10706167..10706179, -
6.58e-50FFCP PHASE1:Hg19::chrX:28605300..28605301,+#_c0fcd87985601dd79d13a6542a384021p8@IL1RAPL1
6.58e-50FFCP PHASE2:Hg19::chr11:67190503..67190512,+#_c0fcd87985601dd79d13a6542a384021p8@CARNS1
6.58e-50FFCP PHASE2:Hg19::chr9:112191163..112191174,-#_c0fcd87985601dd79d13a6542a384021p10@PTPN3
6.58e-50FFCP PHASE2:Hg19::chr2:219610931..219610941,+#_c0fcd87985601dd79d13a6542a384021p13@TTLL4
6.58e-50FFCP PHASE2:Hg19::chr11:117585539..117585541,-#_c0fcd87985601dd79d13a6542a384021p@chr11:117585539..117585541, -
6.58e-50FFCP PHASE1:Hg19::chr9:112191163..112191174,-#_c0fcd87985601dd79d13a6542a384021p10@PTPN3
6.58e-50FFCP PHASE1:Hg19::chr2:219610931..219610941,+#_c0fcd87985601dd79d13a6542a384021p13@TTLL4

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0001018&oldid=3277179"