CL:0002590
From FANTOM5_SSTAR
| Name: | smooth muscle cell of the brain vasculature |
|---|---|
| Namespace: | cell |
| Definition: | "A vascular associated smooth muscle cell of the brain vasculature." [GOC:tfm] |
| Created by: | tmeehan |
| Creation date: | 2011-03-06T05:01:20Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000359(vascular associated smooth muscle cell),CL:0002319(neural cell) |
|---|---|
| part_of: | UBERON:0005284(brain vasculature) |
Children
| derives from: | FF:0000170 (human smooth muscle cell of the brain vasculature sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11234-116D1 (Smooth Muscle Cells - Brain Vascular, donor1)
- 11315-117D1 (Smooth Muscle Cells - Brain Vascular, donor2)
- 11391-118C5 (Smooth Muscle Cells - Brain Vascular, donor3)
Mouse (Mus musculus)
- 11234-116D1 (Smooth Muscle Cells - Brain Vascular, donor1)
- 11315-117D1 (Smooth Muscle Cells - Brain Vascular, donor2)
- 11391-118C5 (Smooth Muscle Cells - Brain Vascular, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002590 (smooth muscle cell of the brain vasculature), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.53e-44 | FFCP PHASE1:Hg19::chr8:128902571..128902583,+#_57f2b181eb68b311f5c96866d9c467a6 | p15@PVT1 |
| 1.53e-44 | FFCP PHASE2:Hg19::chr8:128902571..128902583,+#_57f2b181eb68b311f5c96866d9c467a6 | p15@PVT1 |
| 4.84e-30 | FFCP PHASE1:Hg19::chr11:73020686..73020697,+#_806fa2cbb2345f82deefa1b9dcd49f33 | p23@ARHGEF17 |
| 4.84e-30 | FFCP PHASE2:Hg19::chr11:73020686..73020697,+#_806fa2cbb2345f82deefa1b9dcd49f33 | p23@ARHGEF17 |
| 3.38e-25 | FFCP PHASE2:Hg19::chr6:72970377..72970387,+#_a795af5f4532ec82aa8783bbc85e840b | p20@RIMS1 |
| 3.38e-25 | FFCP PHASE1:Hg19::chr6:72970377..72970387,+#_a795af5f4532ec82aa8783bbc85e840b | p20@RIMS1 |
| 3.27e-23 | FFCP PHASE1:Hg19::chr3:147106858..147106869,-#_2732bd3e803bd38702fd6e5b2a3b9fc9 | p25@ZIC4 |
| 3.27e-23 | FFCP PHASE2:Hg19::chr3:147106858..147106869,-#_2732bd3e803bd38702fd6e5b2a3b9fc9 | p25@ZIC4 |
| 4.09e-23 | FFCP PHASE1:Hg19::chr10:14457224..14457226,+#_5e4d8104b18544ba50ad3d848013c600 | p@chr10:14457224..14457226, + |
| 4.09e-23 | FFCP PHASE1:Hg19::chr5:156811295..156811314,+#_5e4d8104b18544ba50ad3d848013c600 | p35@CYFIP2 |
| 4.09e-23 | FFCP PHASE2:Hg19::chr10:14457224..14457226,+#_5e4d8104b18544ba50ad3d848013c600 | p@chr10:14457224..14457226, + |
| 4.09e-23 | FFCP PHASE2:Hg19::chr5:156811295..156811314,+#_5e4d8104b18544ba50ad3d848013c600 | p35@CYFIP2 |
| 1.29e-21 | FFCP PHASE1:Hg19::chr6:72970412..72970435,+#_5e9e85ba5f92eeeb2b91e8f273c31221 | p11@RIMS1 |
| 1.29e-21 | FFCP PHASE2:Hg19::chr6:72970412..72970435,+#_5e9e85ba5f92eeeb2b91e8f273c31221 | p11@RIMS1 |
| 2.77e-20 | FFCP PHASE2:Hg19::chr6:72970389..72970411,+#_877b2f3bc58d043f4a622000e9722bef | p6@RIMS1 |
| 2.77e-20 | FFCP PHASE1:Hg19::chr6:72970389..72970411,+#_877b2f3bc58d043f4a622000e9722bef | p6@RIMS1 |
| 3.32e-20 | FFCP PHASE2:Hg19::chrX:31284990..31284993,-#_905f43a16ee61637e08b56bebdd29c96 | p17@DMD |
| 3.32e-20 | FFCP PHASE1:Hg19::chrX:31284990..31284993,-#_905f43a16ee61637e08b56bebdd29c96 | p17@DMD |
| 2.04e-19 | FFCP PHASE1:Hg19::chr10:60516419..60516420,+#_91730613f7a0b06d7406265889732d28 | p@chr10:60516419..60516420, + |
| 2.04e-19 | FFCP PHASE2:Hg19::chr10:60516419..60516420,+#_91730613f7a0b06d7406265889732d28 | p@chr10:60516419..60516420, + |
| 6.76e-18 | FFCP PHASE2:Hg19::chr4:56904090..56904097,-#_a308951a22b8d288f0b384d6fabd782b | p@chr4:56904090..56904097, - |
| 6.76e-18 | FFCP PHASE1:Hg19::chr4:56904090..56904097,-#_a308951a22b8d288f0b384d6fabd782b | p@chr4:56904090..56904097, - |
| 8.0e-18 | FFCP PHASE1:Hg19::chr12:78333879..78333896,+#_d01fd209d114b15079ee9f2876462c6f | p21@NAV3 |
| 8.0e-18 | FFCP PHASE2:Hg19::chr12:78333879..78333896,+#_d01fd209d114b15079ee9f2876462c6f | p21@NAV3 |
| 8.98e-18 | FFCP PHASE1:Hg19::chr1:31842256..31842273,+#_fcbde8d553e9b22d6eb6a07c4a328ada | p@chr1:31842256..31842273, + |
| 8.98e-18 | FFCP PHASE2:Hg19::chr1:31842256..31842273,+#_fcbde8d553e9b22d6eb6a07c4a328ada | p@chr1:31842256..31842273, + |
| 9.46e-18 | FFCP PHASE1:Hg19::chr9:16515712..16515717,-#_d18e2725cb32b4c002eb910e3167c4e4 | p@chr9:16515712..16515717, - |
| 9.46e-18 | FFCP PHASE2:Hg19::chr9:16515712..16515717,-#_d18e2725cb32b4c002eb910e3167c4e4 | p@chr9:16515712..16515717, - |
| 1.64e-17 | FFCP PHASE2:Hg19::chr10:128000698..128000700,-#_9c9392368a5274a95ae9548d21977e90 | p@chr10:128000698..128000700, - |
| 1.64e-17 | FFCP PHASE1:Hg19::chr10:128000698..128000700,-#_9c9392368a5274a95ae9548d21977e90 | p@chr10:128000698..128000700, - |
| 7.83e-16 | FFCP PHASE1:Hg19::chr4:169540045..169540056,+#_ee03344eabdb79b5b96392aab4983c6e | p@chr4:169540045..169540056, + |
| 7.83e-16 | FFCP PHASE2:Hg19::chr4:169540045..169540056,+#_ee03344eabdb79b5b96392aab4983c6e | p@chr4:169540045..169540056, + |
| 1.32e-15 | FFCP PHASE1:Hg19::chr11:60640905..60640919,+#_1273acc0a8965c99c6f829afba7aa3d3 | p@chr11:60640905..60640919, + |
| 1.32e-15 | FFCP PHASE2:Hg19::chr11:60640905..60640919,+#_1273acc0a8965c99c6f829afba7aa3d3 | p@chr11:60640905..60640919, + |
| 8.08e-15 | FFCP PHASE2:Hg19::chr11:60610073..60610090,+#_7ee42c1dca2aa382c94c5104df492cb3 | p6@CCDC86 |
| 8.08e-15 | FFCP PHASE1:Hg19::chr11:60610073..60610090,+#_7ee42c1dca2aa382c94c5104df492cb3 | p6@CCDC86 |
| 1.4e-14 | FFCP PHASE2:Hg19::chr5:142023741..142023750,-#_85b7231bc7d7bcbb1ce09cc9207553af | p18@FGF1 |
| 1.4e-14 | FFCP PHASE1:Hg19::chr5:142023741..142023750,-#_85b7231bc7d7bcbb1ce09cc9207553af | p18@FGF1 |
| 1.6e-14 | FFCP PHASE2:Hg19::chr11:60680219..60680235,+#_8cb83ea2d06e15b694bb0ae8ea672d6c | p@chr11:60680219..60680235, + |
| 1.6e-14 | FFCP PHASE1:Hg19::chr3:61876111..61876115,+#_8cb83ea2d06e15b694bb0ae8ea672d6c | p@chr3:61876111..61876115, + |
| 1.6e-14 | FFCP PHASE2:Hg19::chr3:61876111..61876115,+#_8cb83ea2d06e15b694bb0ae8ea672d6c | p@chr3:61876111..61876115, + |
| 1.6e-14 | FFCP PHASE1:Hg19::chr11:60680219..60680235,+#_8cb83ea2d06e15b694bb0ae8ea672d6c | p@chr11:60680219..60680235, + |
| 1.62e-14 | FFCP PHASE1:Hg19::chr12:15942091..15942108,-#_d7112876d22bb6db3b144e923690388b | p13@EPS8 |
| 1.62e-14 | FFCP PHASE1:Hg19::chr2:217529087..217529099,+#_d7112876d22bb6db3b144e923690388b | p@chr2:217529087..217529099, + |
| 1.62e-14 | FFCP PHASE2:Hg19::chr12:15942091..15942108,-#_d7112876d22bb6db3b144e923690388b | p13@EPS8 |
| 1.62e-14 | FFCP PHASE2:Hg19::chr2:217529087..217529099,+#_d7112876d22bb6db3b144e923690388b | p@chr2:217529087..217529099, + |
| 1.83e-14 | FFCP PHASE2:Hg19::chr9:16477370..16477375,-#_ebd1a53f31c2e61c86efca5c3dc3aa22 | p@chr9:16477370..16477375, - |
| 1.83e-14 | FFCP PHASE1:Hg19::chr9:16477370..16477375,-#_ebd1a53f31c2e61c86efca5c3dc3aa22 | p@chr9:16477370..16477375, - |
| 2.09e-14 | FFCP PHASE1:Hg19::chr11:74751521..74751532,+#_226809b7a180456f0d2dc380eea25af4 | p@chr11:74751521..74751532, + |
| 2.09e-14 | FFCP PHASE2:Hg19::chr12:279860..279871,+#_226809b7a180456f0d2dc380eea25af4 | p@chr12:279860..279871, + |
| 2.09e-14 | FFCP PHASE1:Hg19::chr12:279860..279871,+#_226809b7a180456f0d2dc380eea25af4 | p@chr12:279860..279871, + |
| 2.09e-14 | FFCP PHASE2:Hg19::chr11:74751521..74751532,+#_226809b7a180456f0d2dc380eea25af4 | p@chr11:74751521..74751532, + |
| 5.73e-14 | FFCP PHASE1:Hg19::chr1:103371056..103371072,-#_f2e3969318ba28fa34699d504acb3455 | p@chr1:103371056..103371072, - |
| 5.73e-14 | FFCP PHASE2:Hg19::chr1:103371056..103371072,-#_f2e3969318ba28fa34699d504acb3455 | p@chr1:103371056..103371072, - |
| 1.24e-13 | FFCP PHASE1:Hg19::chr6:35656232..35656237,-#_83eaf25e6f69206d233b9ca58256d554 | p@chr6:35656232..35656237, - |
| 1.24e-13 | FFCP PHASE2:Hg19::chr6:35656232..35656237,-#_83eaf25e6f69206d233b9ca58256d554 | p@chr6:35656232..35656237, - |
| 2.39e-13 | FFCP PHASE2:Hg19::chr3:79817162..79817175,-#_ee33659b5061542344a502814d5292bd | p6@ROBO1 |
| 2.39e-13 | FFCP PHASE1:Hg19::chr3:79817162..79817175,-#_ee33659b5061542344a502814d5292bd | p6@ROBO1 |
| 4.29e-13 | FFCP PHASE2:Hg19::chr10:96046777..96046788,-#_8895909f9c6bc35b6bf046e71f11461a | p4@LOC100128054 |
| 4.29e-13 | FFCP PHASE1:Hg19::chr10:96046777..96046788,-#_8895909f9c6bc35b6bf046e71f11461a | p4@LOC100128054 |
| 5.81e-13 | FFCP PHASE1:Hg19::chr4:86705464..86705469,+#_0d6bb0de9204df4fcdc358f3cbeb43ee | p@chr4:86705464..86705469, + |
| 5.81e-13 | FFCP PHASE2:Hg19::chr4:86705464..86705469,+#_0d6bb0de9204df4fcdc358f3cbeb43ee | p@chr4:86705464..86705469, + |
| 5.85e-13 | FFCP PHASE2:Hg19::chr11:61568644..61568661,-#_072df91773fc208f83fd39b10776954c | p17@FADS1 |
| 5.85e-13 | FFCP PHASE1:Hg19::chr11:61568644..61568661,-#_072df91773fc208f83fd39b10776954c | p17@FADS1 |
| 8.13e-13 | FFCP PHASE1:Hg19::chr5:30104120..30104173,-#_511dc067d9f0300bf7b1d18003a2c0d7 | p@chr5:30104120..30104173, - |
| 8.13e-13 | FFCP PHASE2:Hg19::chr5:30104120..30104173,-#_511dc067d9f0300bf7b1d18003a2c0d7 | p@chr5:30104120..30104173, - |
| 1.26e-12 | FFCP PHASE1:Hg19::chr4:169706237..169706242,+#_b97480e5553d4ee9f4388f5b3c154f2e | p@chr4:169706237..169706242, + |
| 1.26e-12 | FFCP PHASE2:Hg19::chr4:169706237..169706242,+#_b97480e5553d4ee9f4388f5b3c154f2e | p@chr4:169706237..169706242, + |
| 2.07e-12 | FFCP PHASE1:Hg19::chr5:30104096..30104103,-#_8c95cd78c87ada4baf945d48f2b42eff | p@chr5:30104096..30104103, - |
| 2.07e-12 | FFCP PHASE1:Hg19::chr3:146517344..146517356,+#_8c95cd78c87ada4baf945d48f2b42eff | p@chr3:146517344..146517356, + |
| 2.07e-12 | FFCP PHASE2:Hg19::chr3:146517344..146517356,+#_8c95cd78c87ada4baf945d48f2b42eff | p@chr3:146517344..146517356, + |
| 2.07e-12 | FFCP PHASE2:Hg19::chr5:30104096..30104103,-#_8c95cd78c87ada4baf945d48f2b42eff | p@chr5:30104096..30104103, - |
| 2.31e-12 | FFCP PHASE1:Hg19::chr5:149532703..149532711,+#_fe86f9904bc21c7cfc68c67ea3a240e8 | p@chr5:149532703..149532711, + |
| 2.31e-12 | FFCP PHASE2:Hg19::chr11:60615014..60615025,+#_fe86f9904bc21c7cfc68c67ea3a240e8 | p8@CCDC86 |
| 2.31e-12 | FFCP PHASE2:Hg19::chr5:149532703..149532711,+#_fe86f9904bc21c7cfc68c67ea3a240e8 | p@chr5:149532703..149532711, + |
| 2.31e-12 | FFCP PHASE1:Hg19::chr11:60615014..60615025,+#_fe86f9904bc21c7cfc68c67ea3a240e8 | p8@CCDC86 |
| 2.59e-12 | FFCP PHASE2:Hg19::chr6:135196569..135196573,-#_ef72c81d6acd5030c1cc8019efd62921 | p@chr6:135196569..135196573, - |
| 2.59e-12 | FFCP PHASE1:Hg19::chr17:19282079..19282094,+#_ef72c81d6acd5030c1cc8019efd62921 | p14@MAPK7 |
| 2.59e-12 | FFCP PHASE1:Hg19::chr6:135196569..135196573,-#_ef72c81d6acd5030c1cc8019efd62921 | p@chr6:135196569..135196573, - |
| 2.59e-12 | FFCP PHASE2:Hg19::chr17:19282079..19282094,+#_ef72c81d6acd5030c1cc8019efd62921 | p14@MAPK7 |
| 2.89e-12 | FFCP PHASE2:Hg19::chr3:147121835..147121852,-#_37fc8f7c74aeca556f7d1327e3d2e076 | p9@ZIC4 |
| 2.89e-12 | FFCP PHASE2:Hg19::chr5:17604288..17604293,+#_37fc8f7c74aeca556f7d1327e3d2e076 | p@chr5:17604288..17604293, + |
| 2.89e-12 | FFCP PHASE1:Hg19::chr14:61654180..61654191,+#_37fc8f7c74aeca556f7d1327e3d2e076 | p33@PRKCH |
| 2.89e-12 | FFCP PHASE1:Hg19::chr4:178083004..178083050,-#_37fc8f7c74aeca556f7d1327e3d2e076 | p@chr4:178083004..178083050, - |
| 2.89e-12 | FFCP PHASE2:Hg19::chr14:61654180..61654191,+#_37fc8f7c74aeca556f7d1327e3d2e076 | p33@PRKCH |
| 2.89e-12 | FFCP PHASE1:Hg19::chr5:17604288..17604293,+#_37fc8f7c74aeca556f7d1327e3d2e076 | p@chr5:17604288..17604293, + |
| 2.89e-12 | FFCP PHASE2:Hg19::chr4:178083004..178083050,-#_37fc8f7c74aeca556f7d1327e3d2e076 | p@chr4:178083004..178083050, - |
| 2.89e-12 | FFCP PHASE1:Hg19::chr3:147121835..147121852,-#_37fc8f7c74aeca556f7d1327e3d2e076 | p9@ZIC4 |
| 3.24e-12 | FFCP PHASE1:Hg19::chr14:85705824..85705844,-#_750cb62f3db0ba7e3d118a5986aa0585 | p1@ENST00000556016 |
| 3.24e-12 | FFCP PHASE2:Hg19::chr11:9879819..9879831,-#_750cb62f3db0ba7e3d118a5986aa0585 | p@chr11:9879819..9879831, - |
| 3.24e-12 | FFCP PHASE2:Hg19::chr14:85705824..85705844,-#_750cb62f3db0ba7e3d118a5986aa0585 | p1@ENST00000556016 |
| 3.24e-12 | FFCP PHASE1:Hg19::chr11:9879819..9879831,-#_750cb62f3db0ba7e3d118a5986aa0585 | p@chr11:9879819..9879831, - |
| 5.51e-12 | FFCP PHASE1:Hg19::chr6:132270228..132270243,-#_de41d7ea6e19c0f74cff610a5f27c8d3 | p17@CTGF |
| 5.51e-12 | FFCP PHASE2:Hg19::chr6:132270228..132270243,-#_de41d7ea6e19c0f74cff610a5f27c8d3 | p17@CTGF |
| 1.31e-11 | FFCP PHASE1:Hg19::chr11:111685389..111685410,-#_cda99bb4c14d90c8b27000fd0ec535ae | p7@ALG9 |
| 1.31e-11 | FFCP PHASE2:Hg19::chr11:111685389..111685410,-#_cda99bb4c14d90c8b27000fd0ec535ae | p7@ALG9 |
| 1.57e-11 | FFCP PHASE1:Hg19::chr2:51577311..51577340,-#_abda4caeb71eca55608759c4ccb5dd26 | p@chr2:51577311..51577340, - |
| 1.57e-11 | FFCP PHASE2:Hg19::chr2:51577311..51577340,-#_abda4caeb71eca55608759c4ccb5dd26 | p@chr2:51577311..51577340, - |
| 1.59e-11 | FFCP PHASE2:Hg19::chr10:96046756..96046775,-#_edba3975527e76497abcca2cf551ba17 | p2@LOC100128054 |
| 1.59e-11 | FFCP PHASE1:Hg19::chr10:96046756..96046775,-#_edba3975527e76497abcca2cf551ba17 | p2@LOC100128054 |
