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NonredundantMotifs:148

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant148
  • db :UNIPROBE
  • Id :Irf3_secondary
  • name :SCI09
  • score :0.3414365863614239
  • External refs:
EntrezGene:3661
UniProt:3661

  • Internal refs:
EntrezGene:3661


Motif matrix
P0ACGT
10.2365645867121490.1490203135823080.4148106475414390.199604452164104
20.1977372964471040.1390483590820980.4367636233510430.226450721119755
30.5983091817968510.08996276580520240.1242446514232810.187483400974665
40.2121362295708750.05529604102712020.6482715889219510.0842961404800536
50.7471436879279590.02718383950692010.04778891136056090.17788356120456
60.7668245362097130.05123760035727140.0390083670299080.142929496403107
70.4794619284689230.08574251055753620.1755170012387080.259278559734832
80.06462548912661840.1073663560950860.7530792126228980.0749289421553972
90.05803372081282210.0740961962335670.8209365278851960.0469335550684149
100.2700715469452070.08871379200892510.2171577008759430.424056960169925
110.06386724204167720.3845425496712230.4185137409979260.133076467289173
120.04735161178126530.5972096819255730.167770181121980.187668525171182
130.2667371198452610.150063467469410.3822638914595440.200935521225784
140.3810785356359480.2044266223417780.2184915404261120.196003301596161

Sub Motif Members