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NonredundantMotifs:95

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant95
  • db :HOCOMOCO
  • Id :PLAG1_f1
  • name  :
  • score :3.7246016239642246
  • External refs:
EntrezGene:5324
UniProt:5324

  • Internal refs:
EntrezGene:5324


Motif matrix
P0ACGT
15.50.516.52.5
25.00.020.00.0
310.00.015.00.0
40.00.025.00.0
50.08.017.00.0
61.014.0000000000000027.0000000000000013.0
713.09.02.01.0
85.08.03.09.0
95.08.06.06.0
1011.02.05.07.000000000000001
118.06.011.00.0
124.02.012.07.000000000000001
1317.04.03.01.0
142.00.020.03.0
151.00.024.00.0
160.00.025.00.0
172.01.017.05.0

Sub Motif Members