NonredundantMotifs:110

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant110
• db :UNIPROBE
• Id :Gata6_secondary
• name :SCI09
• score :0.9063094472438954
  
• External refs:

EntrezGene:2627
UniProt:2627

• Internal refs:

EntrezGene:2627

Motif matrix

P0 A C G T 1 0.0960368996419155 0.0787199781544717 0.658870944690142 0.166372177513471 2 0.0994728560653716 0.47219999758005 0.272163978410855 0.156163167943723 3 0.14872719105279 0.227077886459852 0.409637274466778 0.214557648020579 4 0.280786549503952 0.217654175450364 0.322181237007478 0.179378038038206 5 0.108784342425927 0.723506349252304 0.0809698824228468 0.0867394258989229 6 0.0581708359344613 0.0441019298464845 0.8182698582786 0.0794573759404547 7 0.681346099814647 0.227585810877465 0.0645006879453407 0.0265674013625475 8 0.0262257922834263 0.00747058984524598 0.0700401210015426 0.896263496869785 9 0.896263496869785 0.0700401210015426 0.00747058984524598 0.0262257922834263 10 0.0265674013625475 0.0645006879453407 0.227585810877465 0.681346099814647 11 0.0794573759404547 0.8182698582786 0.0441019298464845 0.0581708359344613 12 0.0867394258989229 0.0809698824228468 0.723506349252304 0.108784342425927 13 0.0818534077052605 0.508630519709729 0.267910525739667 0.141605546845344 14 0.43859863745905 0.302966685076604 0.195554139689766 0.0628805377745799 15 0.0914132380443896 0.182314770498885 0.581418443717068 0.144853547739657 16 0.142535225750042 0.490839659665815 0.0738030604052205 0.292822054178923 17 0.254672750477746 0.169950594399545 0.289663955543823 0.285712699578887