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NonredundantMotifs:57

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant57
  • db :SWISSREGULON
  • Id :NKX2-2,8.p2
  • name :NKX2-2,8
  • score :0.107232453455117
  • External refs:
EntrezGene:NKX2-2
UniProt:NKX2-2

EntrezGene:8
UniProt:8

  • Internal refs:
EntrezGene:NKX2-2

EntrezGene:8


Motif matrix
POACGT
150.2055240.9177210.887409135.08469
20.9858150.66214511.092311124.355078
3179.7189290.9306295.5136160.93217
4187.095344000
519.1670470.900329167.0279680
67.5699041.914381.79216175.8189
776.8986773.644429106.5522380
85.45657469.52166364.3370247.780087
95.6111178.3184543.72791169.437863
100.8812171.7853960184.428731

Sub Motif Members