NonredundantMotifs:40

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known40
• db :UNIPROBE
• Id :Myf6_secondary
• name :SCI09
• score :2.726383469789969
  
• External refs:

EntrezGene:4618
UniProt:4618

• Internal refs:

EntrezGene:4618

Motif matrix

P0 A C G T 1 0.345146488013258 0.26105897598822 0.273931110860127 0.119863425138395 2 0.22213719373244 0.272923002708112 0.332023618603445 0.172916184956003 3 0.269602465977963 0.278951419673728 0.245220682323427 0.206225432024882 4 0.485405791720008 0.144018099371158 0.294420682111543 0.0761554267972912 5 0.577730594798247 0.270563099425945 0.0789547842576704 0.072751521518137 6 0.0700269105790002 0.750815784849967 0.0628186475434988 0.116338657027534 7 0.685017697670726 0.105175239349362 0.137110344038653 0.0726967189412585 8 0.162574046433077 0.071040993448798 0.638464241766771 0.127920718351355 9 0.343240301234647 0.389633340632279 0.206226161983908 0.060900196149167 10 0.0801690845698969 0.790322888125634 0.114210602632884 0.0152974246715846 11 0.167034629133321 0.201642309694909 0.462780389853469 0.168542671318301 12 0.114383107808223 0.664317079667594 0.166143102371949 0.0551567101522349 13 0.39214312802688 0.114474613925907 0.340084685645908 0.153297572401304 14 0.208147487120144 0.577473165873016 0.142693639531859 0.0716857074749806 15 0.16863150929973 0.56313543715974 0.0661812155220432 0.202051838018487