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NonredundantMotifs:172

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :known172
  • db :SWISSREGULON
  • Id :GZF1.p2
  • name  :
  • score :0.02784379488307328
  • External refs:
  • Internal refs:


Motif matrix
POACGT
10.6782779.1719496.37155969.834135
23.059487082.9964330
31.57060679.4896341.6800263.315654
44.9444685.79357773.2819772.035898
53.3615673.26953.0594876.365373
615.4167827.24243229.63033833.766368
71.5894410.6808388.93711574.848526
825.07494255.7320743.1367952.112109
91.5187811.452488073.084652
1078.43531903.4653874.155214
11028.031803058.024117
1278.3098131.6706281.7094434.366036

Sub Motif Members