NonredundantMotifs:160

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known160
• db :HOCOMOCO
• Id :TEF_f1
• name  :
• score :0.06128254407081912
  
• External refs:

EntrezGene:7008
UniProt:7008

• Internal refs:

EntrezGene:7008

Motif matrix

P0 A C G T 1 0.6764705882352936 1.852941176470594 0.6764705882352936 10.794117647058815 2 2.117647058823534 0.0 10.705882352941174 1.1764705882352948 3 3.176470588235294 1.0588235294117643 2.9411764705882297 6.823529411764702 4 0.0 0.0 0.0 14.0 5 3.176470588235294 0.0 3.4117647058823577 7.411764705882348 6 13.17647058823529 0.0 0.8235294117647057 0.0 7 1.0588235294117643 3.8823529411764723 0.0 9.058823529411768 8 4.352941176470586 0.0 8.823529411764705 0.8235294117647057 9 0.0 0.5882352941176474 2.117647058823534 11.29411764705882 10 8.705882352941172 3.4117647058823577 1.0588235294117643 0.8235294117647057 11 9.764705882352946 0.0 2.117647058823534 2.117647058823534 12 5.999999999999992 4.352941176470586 2.588235294117648 1.0588235294117643 13 0.5882352941176474 2.8235294117647123 2.117647058823534 8.470588235294121 14 2.529411764705882 0.4117647058823522 5.94117647058824 5.11764705882353