NonredundantMotifs:127

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known127
• db :UNIPROBE
• Id :Sp100_primary
• name :SCI09
• score :0.033167907260417476
  
• External refs:

EntrezGene:6672
UniProt:6672

• Internal refs:

EntrezGene:6672

Motif matrix

P0 A C G T 1 0.39873852495618 0.130866834931474 0.338755578079987 0.131639062032358 2 0.320698796727274 0.027975079963073 0.0634662440040444 0.587859879305609 3 0.157015297805762 0.0315831289582951 0.0416112366565268 0.769790336579416 4 0.271346572636928 0.151934405807327 0.038803528961829 0.537915492593916 5 0.221418436676526 0.241702546131557 0.174144846627569 0.362734170564348 6 0.312756696579321 0.303979856025763 0.166493504529014 0.216769942865901 7 0.00282610270120303 0.987021033605246 0.00711481609529092 0.00303804759826029 8 0.00211245043186831 0.121645121808968 0.874128737688061 0.00211369007110284 9 0.0897812520385482 0.088889530437363 0.590612861358673 0.230716356165416 10 0.777901957332929 0.0814935111164949 0.0610897523170966 0.0795147792334794 11 0.872234463688342 0.0124342799565988 0.0250442952311877 0.0902869611238717 12 0.707480898631662 0.0477815530498098 0.0286966251317726 0.216040923186756 13 0.488552266697754 0.135945954881275 0.0987897752573325 0.276712003163638 14 0.187811004928595 0.111904179807271 0.208223488184958 0.492061327079177