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NonredundantMotifs:100

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :known100
  • db :UNIPROBE
  • Id :Sp4_secondary
  • name :SCI09
  • score :1.1796062082368315
  • External refs:
EntrezGene:6671
UniProt:6671

  • Internal refs:
EntrezGene:6671


Motif matrix
P0ACGT
10.1463340231192840.3123255970021580.2442806014370750.297059778441483
20.4931553831504460.09260923197025650.1625063333146670.25172905156463
30.5035928579672890.05986256914673580.07756088070316280.358983692182812
40.7633212369119910.01526408472742560.2131135327506240.00830114560995977
50.01241529334338290.02593248239285930.945501611782280.0161506124814777
60.006712652188032240.01522082245923750.950098066268860.0279684590838698
70.06241492957282820.8343027104349870.05450005231717420.048782307675011
80.0110097942817070.02067650649986170.9288205715479220.0394931276705095
90.01278528255848470.02416242611994510.1458215316508220.817230759670749
100.1335950877586480.03396213838008990.7878761708579590.0445666030033028
110.1406968312653350.1804808627975040.4282525472969350.250569758640227
120.03628058097692570.8064115690040420.03351044725963950.123797402759393
130.1579104095311150.4086070002636420.1224271784614320.31105541174381
140.2921850933165070.2600169722733440.1975154066966060.250282527713542
150.2511070684885470.1244795166470010.3594466529831030.264966761881349

Sub Motif Members