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NonredundantMotifs:18

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :known18
  • db :SWISSREGULON
  • Id :TFAP4.p2
  • name  :
  • score :1.850544091503666
  • External refs:
  • Internal refs:


Motif matrix
POACGT
1100.93591911.33949815.57105442.704675
228.79687727.043595108.4870026.223672
363.31096154.77465549.9722152.493315
461.20294232.82276369.0178797.507562
524.33540566.96670630.58410748.664928
61.72718158.4862974.2826686.055001
7161.953211.7289320.9815355.887469
88.3581012.705957157.0437492.443339
90162.8335693.3139984.403579
1012.4111698.24924414.124317135.766416
114.73448729.51466133.9412442.360755
125.83592270.07053338.08363656.561055
1344.020013.053394105.40063118.077111
144.8047995.824147153.4317426.490458
1520.54644472.96262841.17852435.86355
1613.446756145.2411335.2268676.63639
1777.08621827.8304537.08063528.553843
188.43421812.910522119.61681229.589594

Sub Motif Members