Personal tools

FFCP PHASE1:Mm9::chr8:13288173..13288220,+

From FANTOM5_SSTAR

Revision as of 15:41, 13 November 2012 by Autoedit (talk | contribs)
Jump to: navigation, search
Short description:p1@Tmco3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tmco3_5end
Coexpression cluster:MCL_coexpression_mm9:866
Association with transcript: 160bp_to_ENSMUST00000045229, ENSMUST00000084058, NM_172282, uc009kxm.1, uc009kxn.1, uc009kxo.1_5end
EntrezGene:Tmco3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tmco3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G716.98
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I59.42
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I66.37
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.38
CD326+ enterocyte, pool2.CNhs13197.11849-124I411.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I78.73
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I811.45
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E97.88
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.74
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.63
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.96
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.07
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.25
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.52
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A47.40
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.52
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A314.71
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.70
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D212.16
GP2+ M cell, pool1.CNhs13228.11845-124H910.34
GP2+ M cell, pool2.CNhs13231.11846-124I17.32
GP2+ M cell, pool3.CNhs13240.11847-124I26.68
Ileum epithelium, pool1.CNhs13199.10252-104B918.81
Ileum epithelium, pool2.CNhs13232.10253-104C112.60
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C88.87
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G814.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H111.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H324.08
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G923.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H227.32
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H415.05
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D816.11
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D914.19
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B314.32
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B718.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C220.28
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B829.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C333.44
Mouse Astrocytes, donor2.CNhs12078.11552-120C416.94
Mouse Astrocytes, donor3.CNhs12107.11633-122C418.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.20
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.39
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C119.04
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.03
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C511.34
Mouse Granule cells, donor1.CNhs12131.11713-123C311.53
Mouse Granule cells, donor2.CNhs12357.11731-123E319.57
Mouse Granule cells, donor3.CNhs12108.11636-122C712.68
Mouse Meningeal cells, donor1.CNhs12132.11716-123C610.50
Mouse Meningeal cells, donor3.CNhs12109.11639-122D19.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C711.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E713.84
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D214.92
Mouse Microglia, donor1.CNhs12629.11718-123C822.77
Mouse Microglia, donor2.CNhs12634.11736-123E832.27
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D511.61
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F513.37
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D914.09
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F122.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D518.11
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.80
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.36
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D613.79
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D326.43
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F324.01
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D728.42
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D416.35
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F415.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.90
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E429.04
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E526.45
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I633.16
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.97
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F619.93
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E114.17
Mouse Schwann, donor1.CNhs12507.11728-123D99.39
Mouse Schwann, donor2.CNhs12573.11746-123F913.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G317.10
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F77.74
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.40
Mouse hepatocyte, donor6.CNhs13090.11822-124F44.55
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.24
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.99
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E36.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G615.77
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G17.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G39.10
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B611.42
accessory axillary lymph node, adult.CNhs10475.1063-29H97.51
adrenal gland, adult.CNhs10508.49-24D712.62
adrenal gland, embryo E14.CNhs11038.406-44C57.29
adrenal gland, embryo E16.CNhs11004.1254-43D66.70
adrenal gland, embryo E17.CNhs11043.1263-45I18.99
adrenal gland, embryo E18.CNhs11026.1262-18F57.69
adrenal gland, neonate N00.CNhs11191.1311-23C17.88
adrenal gland, neonate N25.CNhs11223.1377-27I39.05
amnion, adult pregnant day17.5.CNhs10488.583-22A84.70
aorta, adult.CNhs10498.46-23H115.18
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F510.19
bone (os femoris), neonate N16.CNhs11225.1525-43A65.96
bone (os femoris), neonate N20.CNhs11195.1350-25C38.73
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B219.62
cerebellum, neonate N30.CNhs11135.1395-42I220.94
colon, adult.CNhs10468.36-18H710.98
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.28
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.29
corpora quadrigemina, adult.CNhs10501.16-22A425.02
corpus striatum, adult.CNhs10487.19-21D818.76
corpus striatum, neonate N00.CNhs11226.630-43F19.30
cortex, adult.CNhs10473.12-14D518.25
cortex, neonate N30.CNhs11107.1392-42F214.83
diencephalon, adult.CNhs10482.20-12F229.92
diencephalon, neonate N30.CNhs11201.1388-42B219.47
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.86
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.34
epididymis, adult.CNhs10490.58-23B28.85
eyeball, adult.CNhs10484.31-12G410.52
eyeball, embryo E12.CNhs11016.345-16C610.02
eyeball, embryo E14.CNhs10521.399-16E29.20
eyeball, embryo E15.CNhs10593.426-16C914.95
eyeball, embryo E17.CNhs11023.1261-18D413.86
eyeball, neonate N00.CNhs11207.633-15C67.69
eyeball, neonate N01.CNhs11140.1532-43E710.38
eyeball, neonate N02.CNhs11205.1551-44G810.40
eyeball, neonate N16.CNhs11188.777-19A214.23
forelimb, embryo E11.CNhs10596.335-25E28.84
forelimb, embryo E12.CNhs10600.359-14H29.08
forelimb, embryo E13.CNhs10589.384-1E214.08
forelimb, embryo E14.CNhs10577.413-26A88.11
forelimb, embryo E15.CNhs11007.437-20E711.40
forelimb, embryo E17.CNhs10598.1517-43C47.31
forelimb, embryo E18.CNhs11008.1520-43B512.55
gonad, embryo E13.CNhs11044.1564-45I610.15
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.35
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.56
heart, embryo E11.CNhs10586.331-24E99.73
heart, embryo E12.CNhs11015.353-12F59.62
heart, embryo E13.CNhs11013.376-3I99.54
heart, embryo E14.CNhs10597.403-26D49.47
heart, embryo E15.CNhs11017.431-16C811.81
heart, embryo E16.CNhs11021.457-17C68.95
heart, embryo E17.CNhs11025.479-18E59.53
heart, embryo E18.CNhs11030.1283-20G312.34
heart, neonate N00.CNhs11213.639-21E37.82
heart, neonate N03.CNhs11221.1349-25I210.20
heart, neonate N10.CNhs11118.749-24G112.81
heart, neonate N16.CNhs11209.782-15G110.30
heart, neonate N20.CNhs11127.821-26I69.94
heart, neonate N25.CNhs11196.1351-25D312.95
heart, neonate N30.CNhs11202.1390-42D213.02
hippocampus, adult.CNhs10478.13-16E816.61
hippocampus, neonate N00.CNhs11228.627-43G110.50
intestinal mucosa, adult.CNhs10506.860-29I312.56
intestine, adult.CNhs10496.178-9A37.40
intestine, embryo E12.CNhs11019.1251-16I56.83
intestine, embryo E13.CNhs11010.381-16D57.43
intestine, embryo E15.CNhs10602.976-16D87.60
intestine, embryo E16.CNhs10585.463-22H47.06
intestine, embryo E17.CNhs10582.482-18D37.78
intestine, embryo E18.CNhs10526.1289-20F78.94
intestine, neonate N00.CNhs11126.644-26D19.97
intestine, neonate N01.CNhs11192.1322-23E911.53
intestine, neonate N06.CNhs11102.688-20B89.05
intestine, neonate N07.CNhs11095.720-20F210.35
intestine, neonate N10.CNhs11098.755-23A59.75
intestine, neonate N20.CNhs11187.827-18D111.68
intestine, neonate N25.CNhs11121.1352-25E311.67
intestine, neonate N30.CNhs11131.1384-42G112.35
kidney, embryo E14.CNhs10606.411-4I98.72
kidney, embryo E15.CNhs10997.434-16F87.20
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I212.42
kidney, embryo E18.CNhs11001.1288-20C710.67
kidney, neonate N00.CNhs11214.646-21G79.75
kidney, neonate N10.CNhs11206.758-6D512.65
kidney, neonate N20.CNhs11113.832-19I118.16
kidney, neonate N25.CNhs11122.1353-25F317.58
kidney, neonate N30.CNhs11203.1385-42H117.28
liver, adult pregnant day01.CNhs10466.508-5B23.26
liver, embryo E12.CNhs10601.355-15F83.67
liver, embryo E13.CNhs10524.378-3H62.95
liver, embryo E14.CNhs10594.409-16E12.47
liver, embryo E15.CNhs10520.433-16D72.84
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A33.56
liver, embryo E18.CNhs10579.499-43G43.74
liver, neonate N00.CNhs11117.641-24F41.78
liver, neonate N03.CNhs11123.1345-25G23.02
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B94.06
liver, neonate N20.CNhs11220.823-25A33.28
liver, neonate N25.CNhs11198.1368-26H14.13
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B115.70
lung, embryo E12.CNhs10522.354-16G26.44
lung, embryo E14.CNhs10604.404-26F87.01
lung, embryo E15.CNhs11020.432-17C57.13
lung, embryo E16.CNhs10998.458-17B67.51
lung, embryo E17.CNhs10605.480-44A611.39
lung, embryo E18.CNhs10583.1287-20I612.62
lung, neonate N00.CNhs11224.640-42C66.63
lung, neonate N06.CNhs11212.683-20E511.67
lung, neonate N07.CNhs11111.715-19A39.08
lung, neonate N10.CNhs11219.750-23E610.36
lung, neonate N20.CNhs11109.822-18A414.75
lung, neonate N25.CNhs11119.1359-25C711.40
lung, neonate N30.CNhs11133.1394-42H215.91
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A116.59
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A114.14
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H25.52
medulla oblongata, adult.CNhs10477.17-12C228.10
medulla oblongata, neonate N30.CNhs11200.1396-42A326.61
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.41
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.85
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E115.14
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E212.10
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E315.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D712.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D814.04
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.61
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D413.76
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D514.61
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D615.81
olfactory brain, adult.CNhs10489.18-22I921.85
ovary, adult.CNhs10507.91-2I716.47
ovary, embryo E18.CNhs11040.505-44H715.85
ovary, neonate N00.CNhs11217.1299-22I47.66
oviduct, adult pregnant day01.CNhs10500.988-6G614.35
pancreas, adult.CNhs10486.34-16E415.93
pancreas, embryo E14.CNhs11012.405-44F49.23
pancreas, embryo E15.CNhs11042.1556-45F28.47
pancreas, embryo E16.CNhs11003.460-26E56.41
pancreas, embryo E17.CNhs10599.1558-45G312.40
pancreas, embryo E18.CNhs10580.1535-43I712.30
pancreas, neonate N00.CNhs11105.645-26G95.69
pancreas, neonate N01.CNhs11138.1531-43D76.54
pancreas, neonate N02.CNhs11139.1539-43D86.42
pancreas, neonate N16.CNhs11136.787-43B66.95
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G825.19
pituitary gland, embryo E12.CNhs11018.346-16E611.16
pituitary gland, embryo E13.CNhs11009.370-44C712.55
pituitary gland, embryo E14.CNhs11037.398-44A513.93
pituitary gland, embryo E15.CNhs10592.427-16B914.54
pituitary gland, embryo E16.CNhs11036.449-43F614.45
pituitary gland, embryo E17.CNhs11039.1265-44F517.44
pituitary gland, neonate N00.CNhs11190.1308-22E912.18
placenta, adult pregnant day10.CNhs10472.539-13I75.40
placenta, adult pregnant day17.CNhs10464.577-18G38.05
prostate, adult.CNhs10470.859-1F813.89
skin, adult.CNhs10492.30-1C38.74
skin, neonate N00.CNhs11124.650-25G46.94
skin, neonate N03.CNhs11215.662-22H36.27
skin, neonate N06.CNhs11097.693-20I54.89
skin, neonate N10.CNhs11108.762-6C43.28
small intestine, neonate N16.CNhs11114.790-21I18.74
spinal cord, adult.CNhs10505.24-13C931.34
spleen, adult.CNhs10465.25-2G25.98
spleen, embryo E16.CNhs11035.461-43C110.11
spleen, embryo E18.CNhs11011.1271-21F26.11
spleen, neonate N10.CNhs11116.752-24D13.39
spleen, neonate N20.CNhs11112.824-19H13.28
spleen, neonate N25.CNhs11099.1354-25G34.35
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.84
stomach, adult.CNhs10503.33-1H618.14
stomach, embryo E12.CNhs10588.356-43E37.91
stomach, embryo E15.CNhs10603.1252-16G89.96
stomach, embryo E16.CNhs11022.459-17D48.10
stomach, embryo E17.CNhs11006.1035-18D511.92
stomach, embryo E18.CNhs10999.1286-20C610.26
stomach, neonate N03.CNhs11193.1340-24B810.25
stomach, neonate N07.CNhs11210.718-18A99.09
stomach, neonate N25.CNhs11104.1355-25E417.80
stomach, neonate N30.CNhs11134.1386-42I115.81
submandibular gland, adult.CNhs10469.59-29C117.40
testis, adult.CNhs10504.57-7G55.64
testis, embryo E13.CNhs11031.389-23F57.92
testis, embryo E15.CNhs11034.443-27C57.11
testis, embryo E16.CNhs11033.470-26G58.56
testis, embryo E17.CNhs11029.486-18I512.66
testis, embryo E18.CNhs11027.503-18G511.83
testis, neonate N00.CNhs11189.1300-22B77.75
testis, neonate N07.CNhs11222.726-26I48.46
testis, neonate N10.CNhs11204.763-44D99.54
testis, neonate N20.CNhs11110.839-18H36.76
testis, neonate N30.CNhs11130.1391-42E25.76
thymus, adult.CNhs10471.38-12B55.69
thymus, embryo E14.CNhs11041.402-44I45.88
thymus, embryo E15.CNhs11005.430-45I24.93
thymus, embryo E16.CNhs11002.456-26C55.72
thymus, embryo E17.CNhs10581.478-18C15.55
thymus, embryo E18.CNhs10595.1273-19G44.97
thymus, neonate N02.CNhs11181.1541-43F85.89
thymus, neonate N03.CNhs11137.2104-43C76.06
thymus, neonate N06.CNhs11197.681-26C45.96
thymus, neonate N07.CNhs11211.713-19D34.42
thymus, neonate N10.CNhs11194.748-24E46.15
thymus, neonate N20.CNhs11186.820-7A25.75
thymus, neonate N25.CNhs11125.1362-25G76.06
thymus, neonate N30.CNhs11132.1393-42G27.01
tongue, adult.CNhs10499.32-1B49.30
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.60
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E415.84
uterus, adult pregnant day19.CNhs10497.590-15F518.58
uterus, adult.CNhs10509.92-27E511.17
vagina, adult.CNhs10502.89-27D57.93
vesicular gland, adult.CNhs10491.51-27F820.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.94
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.73
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.03
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A421.92
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A522.66
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A620.93
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A723.87
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A822.20
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A920.71
whole body, embryo E11.CNhs11014.324-5I83.94
whole body, embryo E12.CNhs10587.857-27C913.97
whole body, embryo E13.CNhs10512.372-23H212.46
whole body, embryo E14.5.CNhs10578.420-27D28.02
whole body, embryo E14.CNhs10519.395-14B13.35
whole body, embryo E16.CNhs10514.453-14F26.62
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.09
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.62
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.93
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.12
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.22
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.39
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.17
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.56
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.43
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G512.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.22
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.98
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.18
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.07
whole body, embryo E17.5.CNhs10513.490-9F911.96
whole body, embryo E17.CNhs10517.475-3I514.99
whole body, embryo E18.CNhs10516.493-3B39.36
whole body, neonate N00.CNhs10525.657-19C26.23
whole body, neonate N01.CNhs10576.659-23C66.70
whole body, neonate N06.CNhs10515.692-21D110.15
whole body, neonate N10.CNhs10518.761-6B48.12





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell4.06e-1544
neurectodermal cell4.06e-1544
neural cell9.19e-1543
electrically responsive cell7.89e-1239
electrically active cell7.89e-1239
neuron1.88e-1033
neuronal stem cell1.88e-1033
neuroblast1.88e-1033
electrically signaling cell1.88e-1033
embryonic cell6.01e-1070
CNS neuron (sensu Vertebrata)2.55e-0823
neuroblast (sensu Vertebrata)2.55e-0823

Uber anatomy
Ontology termp-valuen
central nervous system1.11e-2873
nervous system1.29e-2875
ectoderm-derived structure5.77e-2395
ectoderm5.77e-2395
presumptive ectoderm5.77e-2395
regional part of nervous system2.32e-2154
neurectoderm2.00e-2064
neural plate2.00e-2064
presumptive neural plate2.00e-2064
neural tube4.69e-2052
neural rod4.69e-2052
future spinal cord4.69e-2052
neural keel4.69e-2052
structure with developmental contribution from neural crest1.31e-1892
brain1.56e-1747
future brain1.56e-1747
regional part of brain6.00e-1746
ecto-epithelium2.64e-1673
anterior neural tube1.62e-1340
pre-chordal neural plate3.84e-1349
regional part of forebrain6.41e-1339
forebrain6.41e-1339
future forebrain6.41e-1339
gray matter4.07e-1234
brain grey matter6.14e-1029
regional part of telencephalon6.14e-1029
telencephalon6.14e-1029
anatomical conduit5.05e-09122
posterior neural tube1.65e-0712
chordal neural plate1.65e-0712
tube1.68e-07114
cerebral cortex1.74e-0721
cerebral hemisphere1.74e-0721
pallium1.74e-0721







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr8:13288173..13288220,%2B&oldid=2263029"