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MCL coexpression mm9:65

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Phase1 CAGE Peaks

 Short description
Mm9::chr10:12546728..12546774,-p@chr10:12546728..12546774
-
Mm9::chr10:43724304..43724316,-p4@Aim1
Mm9::chr10:43742074..43742086,-p@chr10:43742074..43742086
-
Mm9::chr10:6511636..6511664,-p@chr10:6511636..6511664
-
Mm9::chr10:85474578..85474641,-p1@Bpifc
Mm9::chr11:100054567..100054570,-p1@Krt9
Mm9::chr11:100258384..100258423,-p@chr11:100258384..100258423
-
Mm9::chr11:101031641..101031648,-p6@Plekhh3
Mm9::chr11:119860422..119860438,+p@chr11:119860422..119860438
+
Mm9::chr11:121380594..121380609,-p2@Zfp750
Mm9::chr11:121380611..121380625,-p3@Zfp750
Mm9::chr11:121380640..121380655,-p1@Zfp750
Mm9::chr11:21016856..21016868,+p@chr11:21016856..21016868
+
Mm9::chr11:36120925..36120928,-p@chr11:36120925..36120928
-
Mm9::chr11:36246605..36246616,-p@chr11:36246605..36246616
-
Mm9::chr11:45979830..45979886,-p1@Nipal4
Mm9::chr11:68702080..68702090,+p2@Rnf222
Mm9::chr11:68702096..68702107,+p3@Rnf222
Mm9::chr11:77651549..77651577,+p5@Myo18a
Mm9::chr11:77651584..77651608,+p7@Myo18a
Mm9::chr11:77651621..77651628,+p18@Myo18a
Mm9::chr11:77651629..77651650,+p6@Myo18a
Mm9::chr11:78200071..78200100,-p1@Foxn1
Mm9::chr11:78200195..78200211,-p2@Foxn1
Mm9::chr11:83880565..83880597,-p1@Dusp14
Mm9::chr11:99354426..99354443,-p1@Krt23
Mm9::chr11:99997253..99997268,-p1@Krt15
Mm9::chr12:113969330..113969333,+p@chr12:113969330..113969333
+
Mm9::chr12:113969420..113969429,+p@chr12:113969420..113969429
+
Mm9::chr12:25257114..25257131,+p4@Grhl1
Mm9::chr12:71773416..71773431,+p@chr12:71773416..71773431
+
Mm9::chr12:80090170..80090174,-p@chr12:80090170..80090174
-
Mm9::chr12:81928594..81928606,+p@chr12:81928594..81928606
+
Mm9::chr13:39994656..39994668,-p@chr13:39994656..39994668
-
Mm9::chr13:40833605..40833615,-p@chr13:40833605..40833615
-
Mm9::chr14:55081633..55081636,-p@chr14:55081633..55081636
-
Mm9::chr14:57751371..57751388,-p8@Gjb6
Mm9::chr14:70856799..70856821,+p6@Phyhip
Mm9::chr14:70954349..70954367,+p@chr14:70954349..70954367
+
Mm9::chr15:101200587..101200600,-p1@Krt80
Mm9::chr15:102087880..102087927,-p2@Rarg
Mm9::chr15:102552581..102552593,-p3@Calcoco1
Mm9::chr15:12423244..12423288,-p@chr15:12423244..12423288
-
Mm9::chr15:34608930..34608963,-p6@Nipal2
Mm9::chr15:75844748..75844776,-p4@Fam83h
Mm9::chr15:76064231..76064246,-p3@Parp10
Mm9::chr15:79285958..79285990,-p@chr15:79285958..79285990
-
Mm9::chr15:97561726..97561738,-p4@Endou
Mm9::chr15:97561758..97561777,-p2@Endou
Mm9::chr15:97561812..97561824,-p5@Endou
Mm9::chr16:20677687..20677707,+p@chr16:20677687..20677707
+
Mm9::chr16:20677726..20677745,+p@chr16:20677726..20677745
+
Mm9::chr16:25801993..25802014,+p1@Trp63
Mm9::chr16:25825019..25825027,+p@chr16:25825019..25825027
+
Mm9::chr16:25842644..25842647,+p@chr16:25842644..25842647
+
Mm9::chr16:5132581..5132606,-p2@Ppl
Mm9::chr16:56831885..56831903,-p4@Tmem45a
Mm9::chr16:56831922..56831932,-p9@Tmem45a
Mm9::chr17:24580022..24580035,-p2@Dnase1l2
Mm9::chr17:24580038..24580054,-p1@Dnase1l2
Mm9::chr17:28995456..28995498,+p2@Pnpla1
Mm9::chr17:34068016..34068041,-p@chr17:34068016..34068041
-
Mm9::chr17:35198436..35198442,-p@chr17:35198436..35198442
-
Mm9::chr17:35204262..35204277,+p1@Ly6g6c
Mm9::chr17:35205639..35205657,+p@chr17:35205639..35205657
+
Mm9::chr17:35205767..35205776,+p@chr17:35205767..35205776
+
Mm9::chr17:35205849..35205867,+p@chr17:35205849..35205867
+
Mm9::chr17:35214005..35214018,+p2@Ly6g6e
Mm9::chr17:37079855..37079869,+p1@Rnf39
Mm9::chr17:42829160..42829187,-p2@Gpr115
Mm9::chr17:42829251..42829271,-p3@Gpr115
Mm9::chr17:42878973..42878976,-p5@Gpr111
Mm9::chr17:42879001..42879034,-p2@Gpr111
Mm9::chr17:42879074..42879086,-p3@Gpr111
Mm9::chr17:42879094..42879111,-p4@Gpr111
Mm9::chr17:42879116..42879138,-p1@Gpr111
Mm9::chr17:56693805..56693849,-p@chr17:56693805..56693849
-
Mm9::chr18:15222586..15222623,-p2@Kctd1
Mm9::chr18:20160504..20160515,-p2@Dsc3
Mm9::chr18:20160518..20160564,-p1@Dsc3
Mm9::chr18:20160594..20160605,-p3@Dsc3
Mm9::chr18:20160840..20160862,-p4@Dsc3
Mm9::chr18:20160873..20160884,-p5@Dsc3
Mm9::chr18:20264483..20264486,-p@chr18:20264483..20264486
-
Mm9::chr18:20273111..20273120,-p8@Dsc1
Mm9::chr18:20273133..20273138,-p9@Dsc1
Mm9::chr18:36690686..36690702,+p@chr18:36690686..36690702
+
Mm9::chr18:38129624..38129635,-p2@Fchsd1
Mm9::chr18:38363438..38363449,-p@chr18:38363438..38363449
-
Mm9::chr18:38363452..38363482,-p@chr18:38363452..38363482
-
Mm9::chr18:38363487..38363490,-p@chr18:38363487..38363490
-
Mm9::chr18:38363496..38363505,-p@chr18:38363496..38363505
-
Mm9::chr18:42213381..42213392,+p5@Sh3rf2
Mm9::chr19:34175445..34175473,+p1@Lipm
Mm9::chr19:37428110..37428144,-p@chr19:37428110..37428144
-
Mm9::chr19:4721184..4721195,+p@chr19:4721184..4721195
+
Mm9::chr19:4721215..4721225,+p@chr19:4721215..4721225
+
Mm9::chr19:4721276..4721283,+p@chr19:4721276..4721283
+
Mm9::chr19:47448153..47448169,-p@chr19:47448153..47448169
-
Mm9::chr19:47490637..47490652,-p@chr19:47490637..47490652
-
Mm9::chr19:5704437..5704468,+p1@Kcnk7
Mm9::chr1:108757721..108757774,+p1@Serpinb5
Mm9::chr1:109407993..109408008,+p1@Serpinb2
Mm9::chr1:109408104..109408109,+p4@Serpinb2
Mm9::chr1:173300476..173300490,+p2@Pvrl4
Mm9::chr1:173300516..173300539,+p1@Pvrl4
Mm9::chr1:195336396..195336410,-p1@Mir205
Mm9::chr1:34217099..34217116,+p2@Dst
Mm9::chr1:74838324..74838342,+p2@Wnt10a
Mm9::chr1:92941063..92941075,+p@chr1:92941063..92941075
+
Mm9::chr2:119000219..119000263,+p1@Gm14137
Mm9::chr2:119859165..119859183,+p3@Jmjd7
p3@Pla2g4b
Mm9::chr2:132771205..132771306,-p1@Fermt1
Mm9::chr2:145676855..145676860,+p@chr2:145676855..145676860
+
Mm9::chr2:158338483..158338507,+p1@Arhgap40
Mm9::chr2:158338541..158338548,+p@chr2:158338541..158338548
+
Mm9::chr2:16278208..16278242,+p7@Plxdc2
Mm9::chr2:16278252..16278297,+p5@Plxdc2
Mm9::chr2:16278303..16278331,+p11@Plxdc2
Mm9::chr2:16278346..16278369,+p10@Plxdc2
Mm9::chr2:29922215..29922227,+p8@Set
Mm9::chr2:30412102..30412137,-p@chr2:30412102..30412137
-
Mm9::chr2:5604761..5604764,+p@chr2:5604761..5604764
+
Mm9::chr2:59617756..59617778,+p2@Tanc1
Mm9::chr2:91805878..91805895,-p7@Dgkz
Mm9::chr3:135101244..135101267,+p2@Gm4596
p4@Ube2d3
Mm9::chr3:144761988..144762039,-p1@Clca5
Mm9::chr3:148740053..148740064,-p@chr3:148740053..148740064
-
Mm9::chr3:148740078..148740092,-p@chr3:148740078..148740092
-
Mm9::chr3:148740143..148740157,-p@chr3:148740143..148740157
-
Mm9::chr3:92409863..92409866,-p@chr3:92409863..92409866
-
Mm9::chr3:95055026..95055040,-p2@Bnipl
Mm9::chr3:95055042..95055066,-p1@Bnipl
Mm9::chr3:95110716..95110732,-p2@Anxa9
Mm9::chr3:96474221..96474269,+p1@Ankrd35
Mm9::chr4:116794920..116794958,-p1@ENSMUST00000153924
Mm9::chr4:153455655..153455695,-p@chr4:153455655..153455695
-
Mm9::chr4:154430893..154430936,-p@chr4:154430893..154430936
-
Mm9::chr4:4004657..4004687,-p1@Sdr16c6
Mm9::chr4:57351889..57351919,-p@chr4:57351889..57351919
-
Mm9::chr5:115140983..115141008,-p2@Gltp
Mm9::chr5:23897782..23897825,-p1@Atg9b
Mm9::chr5:23897830..23897849,-p2@Atg9b
Mm9::chr5:63156857..63156871,-p8@Arap2
Mm9::chr5:87061442..87061456,-p2@Tmprss11f
Mm9::chr5:87061485..87061496,-p3@Tmprss11f
Mm9::chr5:93285457..93285469,+p@chr5:93285457..93285469
+
Mm9::chr6:119338982..119338986,-p5@Adipor2
Mm9::chr6:51382822..51382833,+p2@Nfe2l3
Mm9::chr6:67485777..67485796,-p1@Tacstd2
Mm9::chr6:87433375..87433386,-p@chr6:87433375..87433386
-
Mm9::chr7:103670852..103670867,+p15@Odz4
Mm9::chr7:114828996..114829062,+p@chr7:114828996..114829062
+
Mm9::chr7:119382041..119382052,+p@chr7:119382041..119382052
+
Mm9::chr7:130109150..130109161,+p8@Rbbp6
Mm9::chr7:133944039..133944044,-p24@Aldoa
p26@Aldoart1
Mm9::chr7:134623366..134623379,+p@chr7:134623366..134623379
+
Mm9::chr7:13512690..13512699,+p3@2310014L17Rik
Mm9::chr7:137718553..137718566,+p@chr7:137718553..137718566
+
Mm9::chr7:148264069..148264080,+p9@Pkp3
Mm9::chr7:148264087..148264106,+p5@Pkp3
Mm9::chr7:148264165..148264213,+p3@Pkp3
Mm9::chr7:148265024..148265066,+p6@Pkp3
Mm9::chr7:19946556..19946611,+p1@Ppp1r13l
Mm9::chr7:19985208..19985258,-p1@Klc3
Mm9::chr7:20103065..20103079,+p@chr7:20103065..20103079
+
Mm9::chr7:20473257..20473294,-p1@Ceacam19
Mm9::chr7:20473295..20473311,-p2@Ceacam19
Mm9::chr7:25134207..25134220,+p1@Lypd5
Mm9::chr7:25395767..25395795,+p@chr7:25395767..25395795
+
Mm9::chr7:25421498..25421539,+p3@Lypd3
Mm9::chr7:29414940..29414948,+p@chr7:29414940..29414948
+
Mm9::chr7:29649464..29649479,+p1@Lgals7
Mm9::chr7:31536545..31536562,+p1@Sbsn
Mm9::chr7:51066808..51066824,+p1@Klk7
Mm9::chr7:52972711..52972723,-p@chr7:52972711..52972723
-
Mm9::chr7:73888534..73888560,+p@chr7:73888534..73888560
+
Mm9::chr7:89137554..89137565,-p2@Bnc1
Mm9::chr8:14881568..14881575,+p10@Cln8
Mm9::chr8:14881619..14881626,+p9@Cln8
Mm9::chr8:14881629..14881657,+p5@Cln8
Mm9::chr8:95425268..95425279,+p4@Capns2
Mm9::chr8:95425286..95425310,+p1@Capns2
Mm9::chr8:95425318..95425336,+p3@Capns2
Mm9::chr9:106584530..106584545,-p@chr9:106584530..106584545
-
Mm9::chr9:106584567..106584580,-p@chr9:106584567..106584580
-
Mm9::chr9:106584691..106584695,-p@chr9:106584691..106584695
-
Mm9::chr9:14467432..14467450,-p@chr9:14467432..14467450
-
Mm9::chr9:14467458..14467520,-p@chr9:14467458..14467520
-
Mm9::chr9:31720817..31720829,-p5@Barx2
Mm9::chr9:31720843..31720888,-p1@Barx2
Mm9::chr9:31721051..31721068,-p3@Barx2
Mm9::chr9:31923564..31923581,+p6@Arhgap32
Mm9::chr9:31923625..31923634,+p11@Arhgap32
Mm9::chr9:43118870..43118889,+p1@Trim29
Mm9::chr9:43118890..43118901,+p2@Trim29
Mm9::chr9:43119189..43119211,+p@chr9:43119189..43119211
+
Mm9::chr9:43119231..43119242,+p@chr9:43119231..43119242
+
Mm9::chr9:43128599..43128619,+p@chr9:43128599..43128619
+
Mm9::chr9:43876232..43876248,+p@chr9:43876232..43876248
+
Mm9::chr9:53094155..53094159,+p@chr9:53094155..53094159
+
Mm9::chr9:61221312..61221328,+p6@Tle3
Mm9::chr9:78463644..78463688,+p2@Cd109
Mm9::chr9:83672696..83672700,-p@chr9:83672696..83672700
-
Mm9::chr9:83699766..83699777,-p3@Elovl4
Mm9::chr9:83699848..83699867,-p1@Elovl4
Mm9::chrX:109811959..109811982,-p@chrX:109811959..109811982
-
Mm9::chrX:109812023..109812094,-p@chrX:109812023..109812094
-
Mm9::chrX:109812251..109812266,-p1@Pof1b
Mm9::chrX:130697015..130697034,-p1@Xkrx
Mm9::chrX:130697044..130697051,-p2@Xkrx
Mm9::chrX:141783475..141783487,-p2@Lhfpl1
Mm9::chrX:160577302..160577329,+p3@Ace2
Mm9::chrX:45562047..45562058,-p2@Zdhhc9
Mm9::chrX:97970129..97970146,+p10@Dlg3


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0030057desmosome0.0166135092742933
GO:0014704intercalated disc0.0166135092742933
GO:0045111intermediate filament cytoskeleton0.0492527974732983



Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>

Cell Type
Ontology termp-valuen

Uber Anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}

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