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MCL coexpression mm9:91

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Phase1 CAGE Peaks

 Short description
Mm9::chr10:17416380..17416384,-p@chr10:17416380..17416384
-
Mm9::chr10:22368809..22368815,+p5@Slc2a12
Mm9::chr10:43868747..43868756,-p@chr10:43868747..43868756
-
Mm9::chr10:66991117..66991146,+p@chr10:66991117..66991146
+
Mm9::chr10:77230095..77230103,-p@chr10:77230095..77230103
-
Mm9::chr10:83434100..83434119,+p@chr10:83434100..83434119
+
Mm9::chr10:85564906..85564911,-p@chr10:85564906..85564911
-
Mm9::chr10:8747023..8747053,-p@chr10:8747023..8747053
-
Mm9::chr11:100067771..100067789,+p@chr11:100067771..100067789
+
Mm9::chr11:100068064..100068071,+p@chr11:100068064..100068071
+
Mm9::chr11:20781490..20781511,-p@chr11:20781490..20781511
-
Mm9::chr11:36246294..36246305,-p@chr11:36246294..36246305
-
Mm9::chr11:36246333..36246342,-p@chr11:36246333..36246342
-
Mm9::chr11:36246361..36246377,-p@chr11:36246361..36246377
-
Mm9::chr11:36246385..36246397,-p@chr11:36246385..36246397
-
Mm9::chr11:36246457..36246489,-p@chr11:36246457..36246489
-
Mm9::chr11:46034902..46034911,-p@chr11:46034902..46034911
-
Mm9::chr11:67430652..67430669,+p@chr11:67430652..67430669
+
Mm9::chr11:70136022..70136039,-p1@Alox12e
Mm9::chr11:98487658..98487663,+p1@Gsdma3
Mm9::chr11:99394776..99394782,+p@chr11:99394776..99394782
+
Mm9::chr11:99505295..99505313,-p@chr11:99505295..99505313
-
Mm9::chr11:99601435..99601439,-p1@ENSMUST00000105065
Mm9::chr11:99625467..99625471,-p1@ENSMUST00000105060
Mm9::chr12:105290936..105290965,+p@chr12:105290936..105290965
+
Mm9::chr12:105391268..105391276,-p@chr12:105391268..105391276
-
Mm9::chr12:80594620..80594625,-p@chr12:80594620..80594625
-
Mm9::chr13:113381448..113381495,-p@chr13:113381448..113381495
-
Mm9::chr13:33658111..33658121,-p@chr13:33658111..33658121
-
Mm9::chr13:38241316..38241321,+p@chr13:38241316..38241321
+
Mm9::chr13:38241355..38241361,+p@chr13:38241355..38241361
+
Mm9::chr13:47369862..47369869,-p@chr13:47369862..47369869
-
Mm9::chr13:56710594..56710618,+p5@Tgfbi
Mm9::chr14:23454827..23454832,-p@chr14:23454827..23454832
-
Mm9::chr14:34904993..34905000,+p@chr14:34904993..34905000
+
Mm9::chr15:101537858..101537876,-p@chr15:101537858..101537876
-
Mm9::chr15:101540079..101540094,-p@chr15:101540079..101540094
-
Mm9::chr15:101564845..101564850,-p@chr15:101564845..101564850
-
Mm9::chr15:101700126..101700143,-p1@Krt77
Mm9::chr15:101700233..101700241,-p2@Krt77
Mm9::chr15:35243028..35243069,+p@chr15:35243028..35243069
+
Mm9::chr15:79498971..79498976,+p@chr15:79498971..79498976
+
Mm9::chr16:24012830..24012836,+p@chr16:24012830..24012836
+
Mm9::chr16:24013460..24013467,-p@chr16:24013460..24013467
-
Mm9::chr16:24013485..24013495,-p@chr16:24013485..24013495
-
Mm9::chr16:30283252..30283257,-p2@Lrrc15
Mm9::chr16:89092340..89092350,+p@chr16:89092340..89092350
+
Mm9::chr16:89122776..89122779,-p@chr16:89122776..89122779
-
Mm9::chr16:89129446..89129450,+p@chr16:89129446..89129450
+
Mm9::chr16:89133101..89133103,+p@chr16:89133101..89133103
+
Mm9::chr16:89169678..89169682,+p1@Gm19364
Mm9::chr16:89174977..89174981,+p1@ENSMUST00000089097
Mm9::chr16:89183504..89183508,+p@chr16:89183504..89183508
+
Mm9::chr16:89206103..89206107,+p1@Gm2692
p1@Gm6379
p1@Krtap20-2
p1@Krtap6-3
p1@LOC100045008
p1@LOC100048551
Mm9::chr16:89211720..89211726,+p@chr16:89211720..89211726
+
Mm9::chr16:89216174..89216177,+p@chr16:89216174..89216177
+
Mm9::chr16:89227071..89227076,+p@chr16:89227071..89227076
+
Mm9::chr16:89251242..89251248,+p@chr16:89251242..89251248
+
Mm9::chr16:89274696..89274702,+p@chr16:89274696..89274702
+
Mm9::chr16:89288572..89288579,+p@chr16:89288572..89288579
+
Mm9::chr16:89307171..89307182,+p@chr16:89307171..89307182
+
Mm9::chr17:14011569..14011589,+p8@Mllt4
Mm9::chr17:14011908..14011919,+p13@Mllt4
Mm9::chr17:14011923..14011933,+p14@Mllt4
Mm9::chr17:29235674..29235685,+p@chr17:29235674..29235685
+
Mm9::chr17:35211430..35211442,-p2@Ly6g6d
Mm9::chr17:37126473..37126481,-p1@H2-M5
Mm9::chr17:62954305..62954307,-p@chr17:62954305..62954307
-
Mm9::chr17:63231450..63231522,-p@chr17:63231450..63231522
-
Mm9::chr17:63231775..63231809,-p@chr17:63231775..63231809
-
Mm9::chr17:7838160..7838168,+p@chr17:7838160..7838168
+
Mm9::chr19:10954879..10954901,-p3@Tmem109
Mm9::chr19:25375076..25375082,+p@chr19:25375076..25375082
+
Mm9::chr19:47766436..47766469,-p2@Col17a1
Mm9::chr19:47766497..47766517,-p1@Col17a1
Mm9::chr19:47766518..47766523,-p6@Col17a1
Mm9::chr19:47766532..47766543,-p5@Col17a1
Mm9::chr19:9080194..9080198,+p@chr19:9080194..9080198
+
Mm9::chr19:9176962..9176969,+p@chr19:9176962..9176969
+
Mm9::chr19:9177003..9177024,+p@chr19:9177003..9177024
+
Mm9::chr1:134968330..134968350,-p@chr1:134968330..134968350
-
Mm9::chr1:182312482..182312494,+p@chr1:182312482..182312494
+
Mm9::chr1:191609138..191609151,+p@chr1:191609138..191609151
+
Mm9::chr1:34227957..34227994,+p@chr1:34227957..34227994
+
Mm9::chr1:59600983..59600997,+p@chr1:59600983..59600997
+
Mm9::chr1:59601035..59601089,+p@chr1:59601035..59601089
+
Mm9::chr2:129303859..129303891,-p@chr2:129303859..129303891
-
Mm9::chr2:152582732..152582741,+p@chr2:152582732..152582741
+
Mm9::chr2:20261028..20261030,-p@chr2:20261028..20261030
-
Mm9::chr2:33192422..33192429,-p@chr2:33192422..33192429
-
Mm9::chr2:73971558..73971583,+p@chr2:73971558..73971583
+
Mm9::chr2:79479351..79479364,+p8@Ssfa2
Mm9::chr3:92992504..92992522,+p@chr3:92992504..92992522
+
Mm9::chr3:93246329..93246336,+p@chr3:93246329..93246336
+
Mm9::chr3:93247815..93247825,+p@chr3:93247815..93247825
+
Mm9::chr3:93248356..93248364,+p@chr3:93248356..93248364
+
Mm9::chr3:94935357..94935362,+p@chr3:94935357..94935362
+
Mm9::chr4:111645637..111645677,+p3@Skint7
Mm9::chr4:111745281..111745290,+p3@Skint4
Mm9::chr4:111904871..111904879,+p4@Skint3
Mm9::chr4:111957406..111957418,+p@chr4:111957406..111957418
+
Mm9::chr4:112933933..112933936,-p@chr4:112933933..112933936
-
Mm9::chr4:113672092..113672102,-p2@Skint5
Mm9::chr4:113672105..113672116,-p1@Skint5
Mm9::chr4:113672125..113672136,-p3@Skint5
Mm9::chr4:113836025..113836039,+p3@Skint11
Mm9::chr4:113836042..113836053,+p2@Skint11
Mm9::chr4:113836063..113836075,+p1@Skint11
Mm9::chr4:56070658..56070666,+p@chr4:56070658..56070666
+
Mm9::chr5:118872009..118872014,-p@chr5:118872009..118872014
-
Mm9::chr5:52583423..52583444,-p@chr5:52583423..52583444
-
Mm9::chr5:68157953..68157957,-p@chr5:68157953..68157957
-
Mm9::chr5:98129817..98129834,+p@chr5:98129817..98129834
+
Mm9::chr6:140346639..140346660,-p@chr6:140346639..140346660
-
Mm9::chr6:97335192..97335197,+p@chr6:97335192..97335197
+
Mm9::chr6:97778233..97778243,+p@chr6:97778233..97778243
+
Mm9::chr7:133956181..133956200,+p4@Fam57b
Mm9::chr7:137768128..137768136,+p@chr7:137768128..137768136
+
Mm9::chr7:137768139..137768154,+p@chr7:137768139..137768154
+
Mm9::chr7:18761819..18761824,+p1@Igfl3
Mm9::chr7:18830734..18830751,+p2@Mill1
Mm9::chr7:20044584..20044602,-p@chr7:20044584..20044602
-
Mm9::chr7:20169703..20169713,-p@chr7:20169703..20169713
-
Mm9::chr7:27905825..27905859,+p@chr7:27905825..27905859
+
Mm9::chr7:52810285..52810292,+p9@Hsd17b14
Mm9::chr7:55913443..55913483,-p@chr7:55913443..55913483
-
Mm9::chr7:55947129..55947144,-p@chr7:55947129..55947144
-
Mm9::chr7:55947146..55947151,-p@chr7:55947146..55947151
-
Mm9::chr7:55947155..55947177,-p@chr7:55947155..55947177
-
Mm9::chr7:55947194..55947199,-p@chr7:55947194..55947199
-
Mm9::chr8:19225474..19225482,+p1@Defb6
Mm9::chr8:64079078..64079080,+p@chr8:64079078..64079080
+
Mm9::chr8:70682388..70682415,-p@chr8:70682388..70682415
-
Mm9::chr8:88732929..88732933,+p@chr8:88732929..88732933
+
Mm9::chr8:98013921..98013958,-p@chr8:98013921..98013958
-
Mm9::chr9:71432394..71432398,+p@chr9:71432394..71432398
+
Mm9::chr9:75025479..75025499,+p@chr9:75025479..75025499
+
Mm9::chr9:83736739..83736750,+p@chr9:83736739..83736750
+


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0005882intermediate filament0.0498626448881202
GO:0045111intermediate filament cytoskeleton0.0498626448881202
GO:0043071positive regulation of non-apoptotic programmed cell death0.0498626448881202
GO:0043070regulation of non-apoptotic programmed cell death0.0498626448881202
GO:0048733sebaceous gland development0.0498626448881202
GO:0001949sebaceous gland cell differentiation0.0498626448881202
GO:0016244non-apoptotic programmed cell death0.0498626448881202



Relative expression of the co-expression cluster over median <br>Analyst:


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Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>

Cell Type
Ontology termp-valuen

Uber Anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}

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