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MacroAPE 1083:1-GGAGGAGRAGG

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Full Name: 1-GGAGGAGRAGG,CNhs13817,BestGuess:MZF1.p2.SwissRegulon.nucfreq(0.73663833101872),T:834.0(34.32%),B:11155.7(23.85%),P:1e-30

Motif matrix
POACGT
1210.1680.834622.1640.834
2110.08829.19693.8880.834
3651.3540.834180.9780.834
40.8340.834831.4980.834
558.380.834773.9520.834
6515.4120.834316.920.834
7198.4920.834633.840.834
8363.6240.834468.7080.834
9527.0880.834266.04640.032
10182.6460.834649.6860.834
11292.7340.834539.5980.834

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

SP1#MA0079.207.23753e-050.03445060.068883810GGAGGAGGAGGGGGGGCGGGG-
MZF1_5-13#MA0057.100.0001481530.07052070.070502810GGAGGAGGAGGGGAGGGGGAA+
CHA4#MA0283.100.001580950.7525330.5015628GGAGGAGGAGGGGCGGAGA+
Pax4#MA0068.100.003005071.430410.71502611GGAGGAGGAGGGGGGGGGGAGTGGAGTATTGGAAATTTTTC-
Klf4#MA0039.1-10.004976252.36870.94723910GGAGGAGGAGGTAAAGGAAGG+
MSN4#MA0342.1-20.009554824.548090.9997475GGAGGAGGAGGAGGGG+
MSN2#MA0341.1-20.01015484.833690.9997475GGAGGAGGAGGAGGGG+
RGM1#MA0366.1-20.01015484.833690.9997475GGAGGAGGAGGAGGGG+
btd#MA0443.110.0107245.104610.9997479GGAGGAGGAGGAGGGGGCGGA+
ZMS1#MA0441.100.01156235.503650.9997479GGAGGAGGAGGTGCGGGGAA-
SPIB#MA0081.100.02100349.997610.9997477GGAGGAGGAGGAGAGGAA+