Personal tools

MacroAPE 1083:Motif686

From FANTOM5_SSTAR

Revision as of 13:50, 7 September 2012 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Full Name: motif686

Motif matrix
POACGT
0115566698254188647581
02548815264871089614
03017485800
04001144173714
05126615281686513413
06210391119312091421712
07001723552503

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

EBF1#MA0154.110.0009393610.4471360.8942727CCCTGGGTCCCTTGGGT-
Zfp423#MA0116.140.002323111.10580.949437CCCTGGGGCACCCCTGGGTGCC-
PUT3#MA0358.110.003008561.432070.949437CCCTGGGTTCCCGGG-
TFAP2A#MA0003.100.005650372.689580.949437CCCTGGGCCCCCGGGC-
NHP10#MA0344.100.00603792.874040.949437CCCTGGGGCCGGGGA+
REI1#MA0364.110.009772744.651820.949436CCCTGGGCCCCTGA+
ESR1#MA0112.2110.01056135.027190.949437CCCTGGGAGGTCAGGGTGACCTGGGCC-
ACE2#MA0267.100.01069315.089920.949437CCCTGGGTGCTGGT-
YPR022C#MA0436.1-10.01583277.5363716CCCTGGGCGTGGGG-
PLAG1#MA0163.130.01689568.0422917CCCTGGGCCCCCTTGGGCCCC-
RUNX1#MA0002.200.01729468.2322217CCCTGGGGTCTGTGGTTT+
znf143#MA0088.180.0188658.9797217CCCTGGGGCAAGGCATGATGGGAAATC-