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MacroAPE 1083:5-CCCGCCTTTA

From FANTOM5_SSTAR

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Full Name: 5-CCCGCCTTTA,CNhs13822,BestGuess:TFDP1.p2.SwissRegulon.nucfreq(0.705738347845898),T:458.0(23.46%),B:6244.2(13.46%),P:1e-32

Motif matrix
POACGT
137.556353.57628.39638.472
223.358373.72822.44238.472
315.114391.5923.81627.48
432.51822.9365.94236.64
519.236388.84228.39621.526
614.656361.8233.43448.09
723.35828.85446.716359.072
842.13637.09817.862360.904
926.56432.97626.106372.354
10338.9216.94650.83851.296

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

Klf4#MA0039.100.00117350.5585860.9851910CCCGCCTTTACCTTCCTTTA-
YGR067C#MA0425.120.002952781.405520.9851910CCCGCCTTTAACCCCACTTTTTTG+
UGA3#MA0410.110.003131291.490490.985197CCCGCCTTTATCCCGCCG-
TBP#MA0108.220.006519653.103350.9851910CCCGCCTTTACCCCGCCTTTTATAC-
TBP#MA0108.220.006519653.103350.9851910CCCGCCTTTACCCCGCCTTTTATAC-
MIG2#MA0338.110.006762873.219130.985196CCCGCCTTTACCCCGCA+
YER130C#MA0423.1-10.007244043.448160.985199CCCGCCTTTAACCCCTATT+
MIG3#MA0339.110.009442294.4945316CCCGCCTTTACCCCGCA+
SP1#MA0079.120.0126756.0333218CCCGCCTTTAACCCCGCCCC-
SUT1#MA0399.110.01293266.1559216CCCGCCTTTACCCCGCG-
CHA4#MA0283.120.01744628.3043716CCCGCCTTTATCTCCGCC-
btd#MA0443.100.01748468.32269110CCCGCCTTTATCCGCCCCCT-