Personal tools

MacroAPE 1083:Motif CNGCAT

From FANTOM5_SSTAR

Revision as of 12:53, 7 September 2012 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Full Name: motif_CNGCAT

Motif matrix
POACGT
010283200
02708708708708
030028320
040283200
052832000
060002832

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

twi#MA0249.100.009453344.4997916CAGCATTCGCATATGTTG+
PHD1#MA0355.120.01853918.8245916CAGCATACCTGCAGCA+
SOK2#MA0385.130.0203079.6661416CAGCATTGCCTGCAGGT-