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MacroAPE 1083:4-CTCTCTCTC

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Full Name: 4-CTCTCTCTC,CNhs12610,BestGuess:GTF2I.p2.SwissRegulon.nucfreq(0.695676810727001),T:1446.0(39.30%),B:12640.2(28.34%),P:1e-45

Motif matrix
POACGT
11.4461140.894214.00889.652
2240.036375.96135.924695.526
38.6761434.4321.4461.446
41.446351.37843.381049.796
51.4461441.6621.4461.446
61.446310.891.4461132.218
71.4461263.80426.028154.722
81.446430.908280.524733.122
928.921273.9261.446141.708

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

Trl#MA0205.113.05551e-050.01454420.02908859CTCTCTCTCTTGCTCTCTC+
SP1#MA0079.210.004711832.2428319CTCTCTCTCCCCCGCCCCC+
Pax4#MA0068.1200.0147077.0005519CTCTCTCTCGAAAAATTTCCCATACTCCACTCCCCCCCC+
id1#MA0120.120.01671457.9560819CTCTCTCTCTTTTCCTTTTCG+
Klf4#MA0039.100.01726528.2182319CTCTCTCTCCCTTCCTTTA-