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MacroAPE 1083:2-CGBTDATTA

From FANTOM5_SSTAR

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Full Name: 2-CGBTDATTA,CNhs11738,BestGuess:VSX1,2.p2.SwissRegulon.nucfreq(0.661894239176874),T:615.0(33.41%),B:10129.8(21.84%),P:1e-29

Motif matrix
POACGT
10.615358.545255.2250.615
24.3050.615609.4650.615
343.05164.205231.855176.505
4131.61151.2973.8258.915
5205.4164.575141.45204.18
6351.78131.611.845129.765
7154.36572.570.615387.45
8212.7928.2927.675346.245
9373.3054.30573.185164.205

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

Pax4#MA0068.1180.0001813980.08634540.1655899CGGTAATTAGGGGGGGGAGTGGAGTATTGGAAATTTTTC-
HNF1A#MA0046.1-10.0005169160.2460520.2208948CGGTAATTAGGTAATTATTAACC-
YRR1#MA0439.110.000725950.3455520.2208949CGGTAATTAGCGGAGATAAG-
ARO80#MA0273.190.003487751.660170.6645369CGGTAATTAGATAATTCTCGGCAAGTATGT+
YAP1#MA0415.100.004553742.167580.6645369CGGTAATTAATTTGCTTACGTAAGCTCGT+
Nobox#MA0125.1-10.004570052.175340.6645368CGGTAATTAACCAATTA-
TBP#MA0108.230.006066912.887850.6645369CGGTAATTACCCCGCCTTTTATAC-
TBP#MA0108.230.006066912.887850.6645369CGGTAATTACCCCGCCTTTTATAC-
Ubx#MA0094.1-50.006551823.118670.6645364CGGTAATTAATTA-
YAP6#MA0418.1-10.007403583.524110.6758368CGGTAATTAGTCGCTTACGTAATCAGACC-
STB5#MA0392.100.01138925.421250.6773538CGGTAATTACGGTGTTA+
YDR520C#MA0422.110.01158695.515380.6773539CGGTAATTACCGGAGATAA+
H2.0#MA0448.1-20.01191445.671280.6773537CGGTAATTATTAATTA+
Dll#MA0187.1-20.01284066.112140.6773537CGGTAATTAGTAATTA-
HOXA5#MA0158.100.01298266.179730.6773538CGGTAATTACACTAATT+
SMP1#MA0383.100.01451856.910830.6773539CGGTAATTATGCTAATTTAATTATAGGTAA-
NHP6B#MA0346.1-10.01662637.914130.6773538CGGTAATTATCATATTATATATAAATAAA-
STP2#MA0395.1110.01662637.914130.6773539CGGTAATTATCGTCGTGCGGCGCCGATCA-
YPR196W#MA0437.100.01887998.986850.6773539CGGTAATTACGGAGAAAT-