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Coexpression cluster:C65

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Full id: C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils



Phase1 CAGE Peaks

Hg19::chr10:106013923..106013945,+p2@GSTO1
Hg19::chr10:134143566..134143586,+p@chr10:134143566..134143586
+
Hg19::chr10:135106730..135106743,-p@chr10:135106730..135106743
-
Hg19::chr10:20107406..20107413,-p@chr10:20107406..20107413
-
Hg19::chr10:50396384..50396403,-p2@C10orf128
Hg19::chr10:50396407..50396424,-p3@C10orf128
Hg19::chr10:50396425..50396450,-p1@C10orf128
Hg19::chr10:5326456..5326474,-p@chr10:5326456..5326474
-
Hg19::chr10:5326485..5326513,-p@chr10:5326485..5326513
-
Hg19::chr10:81001828..81001846,+p@chr10:81001828..81001846
+
Hg19::chr10:81002081..81002137,+p@chr10:81002081..81002137
+
Hg19::chr10:81002418..81002443,+p@chr10:81002418..81002443
+
Hg19::chr10:81002444..81002451,+p@chr10:81002444..81002451
+
Hg19::chr10:81002459..81002470,+p@chr10:81002459..81002470
+
Hg19::chr10:81002490..81002499,+p@chr10:81002490..81002499
+
Hg19::chr10:81002562..81002621,+p@chr10:81002562..81002621
+
Hg19::chr10:81002638..81002652,+p@chr10:81002638..81002652
+
Hg19::chr10:81002662..81002681,+p@chr10:81002662..81002681
+
Hg19::chr10:81002783..81002848,+p@chr10:81002783..81002848
+
Hg19::chr10:81002901..81002909,+p@chr10:81002901..81002909
+
Hg19::chr10:81002927..81002938,+p14@ZMIZ1
Hg19::chr10:81028098..81028109,+p@chr10:81028098..81028109
+
Hg19::chr10:81028292..81028314,+p@chr10:81028292..81028314
+
Hg19::chr10:81030821..81030823,+p@chr10:81030821..81030823
+
Hg19::chr10:81034064..81034081,-p@chr10:81034064..81034081
-
Hg19::chr10:81036999..81037047,+p7@ZMIZ1
Hg19::chr10:81048292..81048324,+p@chr10:81048292..81048324
+
Hg19::chr10:81049531..81049547,+p@chr10:81049531..81049547
+
Hg19::chr10:81049616..81049623,+p@chr10:81049616..81049623
+
Hg19::chr10:81051907..81051935,+p@chr10:81051907..81051935
+
Hg19::chr10:81052746..81052768,+p@chr10:81052746..81052768
+
Hg19::chr10:81053101..81053113,+p@chr10:81053101..81053113
+
Hg19::chr10:81053128..81053171,+p@chr10:81053128..81053171
+
Hg19::chr10:81058206..81058225,+p@chr10:81058206..81058225
+
Hg19::chr10:81058659..81058670,+p@chr10:81058659..81058670
+
Hg19::chr10:81058684..81058709,+p@chr10:81058684..81058709
+
Hg19::chr10:81058729..81058759,+p@chr10:81058729..81058759
+
Hg19::chr10:81058831..81058838,+p@chr10:81058831..81058838
+
Hg19::chr10:81107216..81107237,+p1@PPIF
Hg19::chr10:81109447..81109460,+p4@PPIF
Hg19::chr10:81111293..81111304,+p@chr10:81111293..81111304
+
Hg19::chr10:81112062..81112114,+p@chr10:81112062..81112114
+
Hg19::chr10:81113608..81113707,+p@chr10:81113608..81113707
+
Hg19::chr10:81113718..81113778,+p@chr10:81113718..81113778
+
Hg19::chr10:81113959..81113978,+p@chr10:81113959..81113978
+
Hg19::chr11:121447503..121447533,+p9@SORL1
Hg19::chr11:121461068..121461086,+p13@SORL1
Hg19::chr11:124932986..124933018,+p2@SLC37A2
Hg19::chr11:46258933..46258943,+p@chr11:46258933..46258943
+
Hg19::chr11:61447622..61447639,+p3@DAGLA
Hg19::chr11:65150398..65150413,+p@chr11:65150398..65150413
+
Hg19::chr11:65780490..65780495,-p@chr11:65780490..65780495
-
Hg19::chr11:66384906..66384916,+p3@RBM14
Hg19::chr11:70172089..70172105,+p3@PPFIA1
Hg19::chr12:10320190..10320205,-p2@OLR1
Hg19::chr12:10339124..10339160,+p2@C12orf59
Hg19::chr12:125111152..125111184,+p@chr12:125111152..125111184
+
Hg19::chr12:48298765..48298783,-p2@VDR
Hg19::chr12:54767262..54767266,-p@chr12:54767262..54767266
-
Hg19::chr12:54778444..54778451,-p8@ZNF385A
Hg19::chr12:54783880..54783894,-p@chr12:54783880..54783894
-
Hg19::chr12:6658040..6658053,-p10@IFFO1
Hg19::chr12:6658208..6658243,-p5@IFFO1
Hg19::chr12:6659614..6659640,-p4@IFFO1
Hg19::chr12:6659665..6659674,-p9@IFFO1
Hg19::chr12:96588279..96588299,+p4@ELK3
Hg19::chr13:44453807..44453817,+p9@LACC1
Hg19::chr13:49144437..49144448,-p@chr13:49144437..49144448
-
Hg19::chr13:50202532..50202542,-p@chr13:50202532..50202542
-
Hg19::chr13:50202674..50202687,+p2@ARL11
Hg19::chr13:50216333..50216348,+p@chr13:50216333..50216348
+
Hg19::chr13:99127804..99127827,-p@chr13:99127804..99127827
-
Hg19::chr13:99127832..99127863,-p@chr13:99127832..99127863
-
Hg19::chr13:99965572..99965586,+p@chr13:99965572..99965586
+
Hg19::chr14:20943301..20943314,+p2@AF116670
Hg19::chr14:20943365..20943376,+p6@AF116670
Hg19::chr14:55602302..55602304,+p@chr14:55602302..55602304
+
Hg19::chr14:64971014..64971044,+p4@ZBTB1
Hg19::chr14:93099839..93099852,+p@chr14:93099839..93099852
+
Hg19::chr14:93099873..93099888,+p@chr14:93099873..93099888
+
Hg19::chr15:26029087..26029100,-p@chr15:26029087..26029100
-
Hg19::chr15:44085373..44085402,-p@chr15:44085373..44085402
-
Hg19::chr15:59980679..59980732,+p1@ENST00000560199
Hg19::chr15:75354653..75354657,+p@chr15:75354653..75354657
+
Hg19::chr15:90544013..90544051,+p@chr15:90544013..90544051
+
Hg19::chr15:90545434..90545449,+p9@ZNF710
Hg19::chr15:99993287..99993319,+p@chr15:99993287..99993319
+
Hg19::chr16:30727224..30727238,+p@chr16:30727224..30727238
+
Hg19::chr16:31370156..31370160,+p@chr16:31370156..31370160
+
Hg19::chr16:3639462..3639501,-p@chr16:3639462..3639501
-
Hg19::chr16:3639827..3639845,+p@chr16:3639827..3639845
+
Hg19::chr16:67144550..67144561,-p@chr16:67144550..67144561
-
Hg19::chr16:67144656..67144660,-p@chr16:67144656..67144660
-
Hg19::chr17:46080045..46080056,-p@chr17:46080045..46080056
-
Hg19::chr17:4643027..4643036,-p10@CXCL16
Hg19::chr17:47294661..47294681,+p@chr17:47294661..47294681
+
Hg19::chr17:4853442..4853471,+p5@ENO3
Hg19::chr17:57870826..57870837,+p@chr17:57870826..57870837
+
Hg19::chr17:60962303..60962306,+p@chr17:60962303..60962306
+
Hg19::chr17:72542140..72542151,-p5@CD300C
Hg19::chr17:72542163..72542182,-p2@CD300C
Hg19::chr17:73291973..73291990,+p@chr17:73291973..73291990
+
Hg19::chr17:73308280..73308291,-p@chr17:73308280..73308291
-
Hg19::chr17:73308311..73308326,-p@chr17:73308311..73308326
-
Hg19::chr17:74379267..74379297,+p4@SPHK1
Hg19::chr17:78835063..78835075,-p@chr17:78835063..78835075
-
Hg19::chr17:78866856..78866873,+p@chr17:78866856..78866873
+
Hg19::chr17:78866874..78866904,+p@chr17:78866874..78866904
+
Hg19::chr17:78866905..78866920,+p@chr17:78866905..78866920
+
Hg19::chr17:8124665..8124678,+p@chr17:8124665..8124678
+
Hg19::chr18:3449695..3449712,+p9@TGIF1
Hg19::chr18:3449720..3449749,+p2@TGIF1
Hg19::chr18:3449821..3449860,+p7@TGIF1
Hg19::chr19:11679245..11679256,-p@chr19:11679245..11679256
-
Hg19::chr19:11689066..11689084,-p@chr19:11689066..11689084
-
Hg19::chr19:11689256..11689267,+p@chr19:11689256..11689267
+
Hg19::chr19:11689281..11689296,+p@chr19:11689281..11689296
+
Hg19::chr19:11689297..11689311,+p@chr19:11689297..11689311
+
Hg19::chr19:11689518..11689533,-p9@ACP5
Hg19::chr19:11689547..11689564,-p6@ACP5
Hg19::chr19:11689913..11689921,+p@chr19:11689913..11689921
+
Hg19::chr19:11691549..11691554,-p@chr19:11691549..11691554
-
Hg19::chr19:12992190..12992203,-p4@DNASE2
Hg19::chr19:18284995..18285015,+p10@IFI30
Hg19::chr19:18288914..18288931,-p5@CU676849
p5@CU689079
Hg19::chr19:18291934..18291937,+p@chr19:18291934..18291937
+
Hg19::chr19:19051112..19051142,+p@chr19:19051112..19051142
+
Hg19::chr19:19064914..19064929,+p@chr19:19064914..19064929
+
Hg19::chr19:19496539..19496576,+p8@GATAD2A
Hg19::chr19:2271164..2271208,+p4@AF090094
Hg19::chr19:3136024..3136039,+p3@GNA15
Hg19::chr19:45240026..45240036,-p@chr19:45240026..45240036
-
Hg19::chr19:45245470..45245482,+p@chr19:45245470..45245482
+
Hg19::chr19:4553755..4553765,+p@chr19:4553755..4553765
+
Hg19::chr19:4553881..4553890,-p@chr19:4553881..4553890
-
Hg19::chr19:4553899..4553936,-p@chr19:4553899..4553936
-
Hg19::chr19:4553941..4554035,-p@chr19:4553941..4554035
-
Hg19::chr19:4554074..4554110,-p@chr19:4554074..4554110
-
Hg19::chr19:4554122..4554133,-p@chr19:4554122..4554133
-
Hg19::chr19:4554139..4554153,-p@chr19:4554139..4554153
-
Hg19::chr19:4554178..4554199,-p@chr19:4554178..4554199
-
Hg19::chr19:4554207..4554225,-p@chr19:4554207..4554225
-
Hg19::chr19:4554233..4554246,-p@chr19:4554233..4554246
-
Hg19::chr19:4554304..4554315,-p@chr19:4554304..4554315
-
Hg19::chr19:4554391..4554403,-p@chr19:4554391..4554403
-
Hg19::chr19:4555517..4555543,-p@chr19:4555517..4555543
-
Hg19::chr19:4557208..4557239,-p@chr19:4557208..4557239
-
Hg19::chr19:4559572..4559583,-p5@SEMA6B
Hg19::chr19:4559599..4559619,-p4@SEMA6B
Hg19::chr19:4559675..4559715,-p2@SEMA6B
Hg19::chr19:4559720..4559799,-p1@SEMA6B
Hg19::chr19:4559814..4559830,-p3@SEMA6B
Hg19::chr19:49377984..49378040,+p@chr19:49377984..49378040
+
Hg19::chr19:49465701..49465715,-p@chr19:49465701..49465715
-
Hg19::chr19:49469369..49469381,+p@chr19:49469369..49469381
+
Hg19::chr19:49469813..49469830,+p@chr19:49469813..49469830
+
Hg19::chr19:50432132..50432217,+p2@ATF5
Hg19::chr19:51631339..51631373,+p@chr19:51631339..51631373
+
Hg19::chr19:52264268..52264290,+p3@FPR2
Hg19::chr19:52307414..52307433,-p@chr19:52307414..52307433
-
Hg19::chr19:55385646..55385657,+p3@FCAR
Hg19::chr19:7556002..7556030,-p@chr19:7556002..7556030
-
Hg19::chr1:108592945..108592955,+p@chr1:108592945..108592955
+
Hg19::chr1:108593061..108593077,+p@chr1:108593061..108593077
+
Hg19::chr1:108593091..108593109,+p@chr1:108593091..108593109
+
Hg19::chr1:12252525..12252539,+p@chr1:12252525..12252539
+
Hg19::chr1:149901972..149901989,-p@chr1:149901972..149901989
-
Hg19::chr1:154422387..154422390,+p@chr1:154422387..154422390
+
Hg19::chr1:15479643..15479666,+p5@TMEM51
Hg19::chr1:155869427..155869441,-p@chr1:155869427..155869441
-
Hg19::chr1:181013908..181013945,+p@chr1:181013908..181013945
+
Hg19::chr1:212687665..212687673,+p@chr1:212687665..212687673
+
Hg19::chr1:244512513..244512546,+p@chr1:244512513..244512546
+
Hg19::chr1:244615163..244615196,-p2@ADSS
Hg19::chr1:25281902..25281921,+p@chr1:25281902..25281921
+
Hg19::chr1:25360722..25360754,+p@chr1:25360722..25360754
+
Hg19::chr1:25360757..25360774,+p@chr1:25360757..25360774
+
Hg19::chr1:25360780..25360795,+p@chr1:25360780..25360795
+
Hg19::chr1:25425897..25425914,-p@chr1:25425897..25425914
-
Hg19::chr1:27939332..27939345,-p@chr1:27939332..27939345
-
Hg19::chr1:45277688..45277721,+p@chr1:45277688..45277721
+
Hg19::chr20:2295693..2295700,-p@chr20:2295693..2295700
-
Hg19::chr20:25289627..25289655,-p@chr20:25289627..25289655
-
Hg19::chr20:48807648..48807671,+p9@CEBPB
Hg19::chr20:48876519..48876531,-p@chr20:48876519..48876531
-
Hg19::chr20:48909224..48909237,-p@chr20:48909224..48909237
-
Hg19::chr20:5054058..5054064,-p@chr20:5054058..5054064
-
Hg19::chr20:5070979..5071001,-p@chr20:5070979..5071001
-
Hg19::chr20:61192950..61192968,+p@chr20:61192950..61192968
+
Hg19::chr20:632324..632328,-p@chr20:632324..632328
-
Hg19::chr21:30565627..30565638,+p4@LINC00189
Hg19::chr21:30565654..30565682,+p2@LINC00189
Hg19::chr21:36259830..36259842,-p30@RUNX1
Hg19::chr22:35719490..35719507,+p5@TOM1
Hg19::chr22:35785133..35785148,+p@chr22:35785133..35785148
+
Hg19::chr22:46998103..46998127,-p@chr22:46998103..46998127
-
Hg19::chr2:119731876..119731935,+p@chr2:119731876..119731935
+
Hg19::chr2:158732905..158732920,-p@chr2:158732905..158732920
-
Hg19::chr2:169907514..169907530,+p@chr2:169907514..169907530
+
Hg19::chr2:169907540..169907551,+p@chr2:169907540..169907551
+
Hg19::chr2:169926127..169926143,+p2@DHRS9
Hg19::chr2:169926149..169926160,+p4@DHRS9
Hg19::chr2:198002072..198002083,-p@chr2:198002072..198002083
-
Hg19::chr2:218766698..218766769,-p5@TNS1
Hg19::chr2:219246728..219246739,+p6@SLC11A1
Hg19::chr2:219246746..219246759,+p5@SLC11A1
Hg19::chr2:219248811..219248852,+p8@SLC11A1
Hg19::chr2:219613974..219613992,+p@chr2:219613974..219613992
+
Hg19::chr2:230058497..230058500,-p@chr2:230058497..230058500
-
Hg19::chr2:230200207..230200230,+p@chr2:230200207..230200230
+
Hg19::chr2:241564655..241564668,+p3@GPR35
Hg19::chr2:241564889..241564932,+p1@GPR35
Hg19::chr2:241564946..241564955,+p5@GPR35
Hg19::chr2:58273760..58273846,+p2@VRK2
Hg19::chr2:58273887..58273898,+p5@VRK2
Hg19::chr2:58274320..58274344,+p@chr2:58274320..58274344
+
Hg19::chr2:58378901..58378906,+p@chr2:58378901..58378906
+
Hg19::chr2:91960539..91960551,+p@chr2:91960539..91960551
+
Hg19::chr2:91960553..91960566,+p@chr2:91960553..91960566
+
Hg19::chr3:192635973..192635996,-p2@MB21D2
Hg19::chr3:196065277..196065288,-p5@TM4SF19
Hg19::chr3:196065302..196065322,-p2@TM4SF19
Hg19::chr3:196065414..196065425,-p3@TM4SF19
Hg19::chr3:48603225..48603242,-p8@COL7A1
Hg19::chr3:48603660..48603676,-p@chr3:48603660..48603676
-
Hg19::chr3:52529994..52530017,+p@chr3:52529994..52530017
+
Hg19::chr3:98501953..98501955,+p7@ST3GAL6
Hg19::chr4:159092769..159092780,-p12@FAM198B
Hg19::chr4:185314233..185314269,-p@chr4:185314233..185314269
-
Hg19::chr4:2418461..2418476,+p@chr4:2418461..2418476
+
Hg19::chr4:2796691..2796709,+p@chr4:2796691..2796709
+
Hg19::chr4:2826871..2826888,+p11@SH3BP2
Hg19::chr4:681242..681274,+p@chr4:681242..681274
+
Hg19::chr4:84255980..84256009,-p1@HPSE
Hg19::chr5:131279764..131279771,-p@chr5:131279764..131279771
-
Hg19::chr5:135382258..135382274,+p29@TGFBI
Hg19::chr5:135382287..135382307,+p24@TGFBI
Hg19::chr5:135402548..135402562,+p@chr5:135402548..135402562
+
Hg19::chr5:156534012..156534066,-p10@HAVCR2
Hg19::chr5:169697858..169697883,-p@chr5:169697858..169697883
-
Hg19::chr5:177820148..177820162,-p@chr5:177820148..177820162
-
Hg19::chr5:180221221..180221227,-p@chr5:180221221..180221227
-
Hg19::chr5:180242534..180242560,-p7@MGAT1
Hg19::chr5:180245123..180245153,+p@chr5:180245123..180245153
+
Hg19::chr5:180258559..180258573,-p2@uc003mmj.1
Hg19::chr5:77805957..77805964,-p13@LHFPL2
Hg19::chr5:77806048..77806055,-p17@LHFPL2
Hg19::chr5:77806142..77806156,-p8@LHFPL2
Hg19::chr5:77806166..77806224,-p2@LHFPL2
Hg19::chr5:95158644..95158657,-p3@GLRX
Hg19::chr6:106535656..106535682,+p10@PRDM1
Hg19::chr6:106535687..106535706,+p8@PRDM1
Hg19::chr6:106535874..106535878,+p12@PRDM1
Hg19::chr6:106547367..106547394,+p@chr6:106547367..106547394
+
Hg19::chr6:106552921..106552933,+p@chr6:106552921..106552933
+
Hg19::chr6:116761121..116761127,+p@chr6:116761121..116761127
+
Hg19::chr6:15533961..15533988,-p8@DTNBP1
Hg19::chr6:15534018..15534039,-p7@DTNBP1
Hg19::chr6:166671395..166671415,-p@chr6:166671395..166671415
-
Hg19::chr6:29932741..29932763,-p@chr6:29932741..29932763
-
Hg19::chr6:6713323..6713329,-p@chr6:6713323..6713329
-
Hg19::chr7:141363135..141363146,+p@chr7:141363135..141363146
+
Hg19::chr7:151330150..151330157,-p29@PRKAG2
Hg19::chr7:151330169..151330179,-p20@PRKAG2
Hg19::chr7:151330181..151330212,-p3@PRKAG2
Hg19::chr7:151330218..151330259,-p6@PRKAG2
Hg19::chr7:151433703..151433708,+p@chr7:151433703..151433708
+
Hg19::chr7:2832799..2832806,+p@chr7:2832799..2832806
+
Hg19::chr7:39720934..39720937,+p@chr7:39720934..39720937
+
Hg19::chr9:115950834..115950848,-p6@FKBP15
Hg19::chr9:132101645..132101659,+p@chr9:132101645..132101659
+
Hg19::chr9:132106032..132106042,-p@chr9:132106032..132106042
-
Hg19::chr9:134530818..134530849,-p@chr9:134530818..134530849
-
Hg19::chr9:137264942..137264963,+p@chr9:137264942..137264963
+
Hg19::chr9:137264970..137264982,+p@chr9:137264970..137264982
+
Hg19::chrX:150565253..150565267,+p3@VMA21
Hg19::chrX:153286067..153286101,-p@chrX:153286067..153286101
-
Hg19::chrX:47436888..47436926,-p@chrX:47436888..47436926
-


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

No results for this coexpression

Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0044464cell part0.0110169370410131
GO:0006357regulation of transcription from RNA polymerase II promoter0.0110169370410131
GO:0006366transcription from RNA polymerase II promoter0.0110169370410131
GO:0048523negative regulation of cellular process0.0110169370410131
GO:0048519negative regulation of biological process0.0110169370410131
GO:0016481negative regulation of transcription0.0110169370410131
GO:0030228lipoprotein receptor activity0.0110169370410131
GO:0005041low-density lipoprotein receptor activity0.0110169370410131
GO:0045934negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process0.0110169370410131
GO:0045766positive regulation of angiogenesis0.0110169370410131
GO:0009887organ morphogenesis0.0157805697684688
GO:0005764lysosome0.0157805697684688
GO:0000323lytic vacuole0.0157805697684688
GO:0030169low-density lipoprotein binding0.0157805697684688
GO:0031324negative regulation of cellular metabolic process0.0157805697684688
GO:0016564transcription repressor activity0.0160788228917869
GO:0030674protein binding, bridging0.0167097573713658
GO:0005773vacuole0.0196882745563289
GO:0009892negative regulation of metabolic process0.0227931743814195
GO:0003714transcription corepressor activity0.0227931743814195
GO:0016021integral to membrane0.0242153939333534
GO:0031224intrinsic to membrane0.025159992169453
GO:0044425membrane part0.0265856287196721
GO:0008034lipoprotein binding0.0277528664170359
GO:0044262cellular carbohydrate metabolic process0.0301222065828673
GO:0001525angiogenesis0.0301222065828673
GO:0003712transcription cofactor activity0.0308865182260587
GO:0006167AMP biosynthetic process0.0308865182260587
GO:0016656monodehydroascorbate reductase (NADH) activity0.0308865182260587
GO:0030852regulation of granulocyte differentiation0.0308865182260587
GO:0030854positive regulation of granulocyte differentiation0.0308865182260587
GO:0005590collagen type VII0.0308865182260587
GO:0008434vitamin D3 receptor activity0.0308865182260587
GO:0005737cytoplasm0.0308865182260587
GO:0005515protein binding0.0308865182260587
GO:0048514blood vessel morphogenesis0.0308865182260587
GO:0045765regulation of angiogenesis0.0308865182260587
GO:0048646anatomical structure formation0.0335991407795975
GO:0006898receptor-mediated endocytosis0.0340752893108384
GO:0001568blood vessel development0.0378963848122442
GO:0001944vasculature development0.0378963848122442
GO:0003700transcription factor activity0.0378963848122442
GO:0006916anti-apoptosis0.0378963848122442
GO:0043565sequence-specific DNA binding0.0378963848122442
GO:0016020membrane0.0378963848122442
GO:0006670sphingosine metabolic process0.0378963848122442
GO:0032422purine-rich negative regulatory element binding0.0378963848122442
GO:0016889endodeoxyribonuclease activity, producing 3'-phosphomonoesters0.0378963848122442
GO:0046033AMP metabolic process0.0378963848122442
GO:0004531deoxyribonuclease II activity0.0378963848122442
GO:0008481sphinganine kinase activity0.0378963848122442
GO:0035238vitamin A biosynthetic process0.0378963848122442
GO:0042362fat-soluble vitamin biosynthetic process0.0378963848122442
GO:0019862IgA binding0.0378963848122442
GO:00429059-cis-retinoic acid metabolic process0.0378963848122442
GO:00429049-cis-retinoic acid biosynthetic process0.0378963848122442
GO:00470353-alpha(17-beta)-hydroxysteroid dehydrogenase (NAD+) activity0.0378963848122442
GO:0009605response to external stimulus0.0386290112645299
GO:0006629lipid metabolic process0.0427264398054781
GO:0010324membrane invagination0.0427264398054781
GO:0006897endocytosis0.0427264398054781
GO:0045892negative regulation of transcription, DNA-dependent0.045600196476447
GO:0005624membrane fraction0.045600196476447
GO:0005667transcription factor complex0.045600196476447
GO:0009611response to wounding0.045600196476447
GO:0015038glutathione disulfide oxidoreductase activity0.045600196476447
GO:0017050D-erythro-sphingosine kinase activity0.045600196476447
GO:0004566beta-glucuronidase activity0.045600196476447
GO:0004019adenylosuccinate synthase activity0.045600196476447
GO:0007207muscarinic acetylcholine receptor, phospholipase C activating pathway0.045600196476447
GO:0015037peptide disulfide oxidoreductase activity0.045600196476447
GO:0006355regulation of transcription, DNA-dependent0.0460205566465812
GO:0008134transcription factor binding0.0460205566465812
GO:0008202steroid metabolic process0.0484657614488581
GO:0006066alcohol metabolic process0.0484657614488581
GO:0044424intracellular part0.0484657614488581
GO:0000287magnesium ion binding0.0484657614488581
GO:0043066negative regulation of apoptosis0.0484657614488581
GO:0044451nucleoplasm part0.0484657614488581
GO:0043069negative regulation of programmed cell death0.0484657614488581
GO:0009653anatomical structure morphogenesis0.0484657614488581
GO:0048247lymphocyte chemotaxis0.0484657614488581
GO:0001892embryonic placenta development0.0484657614488581
GO:0031958corticosteroid receptor signaling pathway0.0484657614488581
GO:0009249protein lipoylation0.0484657614488581
GO:0042448progesterone metabolic process0.0484657614488581
GO:0030851granulocyte differentiation0.0484657614488581
GO:0045987positive regulation of smooth muscle contraction0.0484657614488581
GO:0042921glucocorticoid receptor signaling pathway0.0484657614488581
GO:0006351transcription, DNA-dependent0.0486981554268126
GO:0032774RNA biosynthetic process0.0489477032778742



Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>

Cell Type
Ontology termp-valuen
myeloid leukocyte9.98e-3776
myeloid cell2.16e-34112
common myeloid progenitor2.16e-34112
granulocyte monocyte progenitor cell3.77e-3371
macrophage dendritic cell progenitor6.25e-3165
monopoietic cell8.40e-3063
monocyte8.40e-3063
monoblast8.40e-3063
promonocyte8.40e-3063
myeloid lineage restricted progenitor cell1.70e-2970
CD14-positive, CD16-negative classical monocyte9.09e-2842
classical monocyte5.34e-2445
hematopoietic stem cell1.46e-22172
angioblastic mesenchymal cell1.46e-22172
leukocyte1.94e-22140
hematopoietic oligopotent progenitor cell2.32e-21165
hematopoietic multipotent progenitor cell2.32e-21165
hematopoietic cell4.24e-21182
hematopoietic lineage restricted progenitor cell6.70e-16124
nongranular leukocyte2.13e-15119
endothelial cell7.77e-0935
endothelial cell of vascular tree6.52e-0824
Uber Anatomy
Ontology termp-valuen
hemolymphoid system1.30e-37112
hematopoietic system7.62e-36102
blood island7.62e-36102
bone marrow6.33e-2980
immune system2.99e-25115
bone element2.51e-2386
lateral plate mesoderm1.15e-21216
adult organism2.26e-20115
skeletal element7.46e-19101
skeletal system7.46e-19101
musculoskeletal system5.06e-08167
blood2.11e-0715
haemolymphatic fluid2.11e-0715
organism substance2.11e-0715


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs



JASPAR motifs

Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}



ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data

(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)

TF#promotersEnrichmentp-valueq-value
EBF1#1879481.537807225306880.001719076307599130.0106601716238776
ESR1#2099192.10289015333430.002095497422132370.012120716397324
FOS#2353571.844904505780513.92048656211706e-060.000127555045501852
FOSL1#8061223.142801272518732.94797947448122e-060.000101011820319995
FOSL2#2355271.644300058716420.008136523413026520.0321322834732314
JUN#3725401.8004070780340.0002263262055307780.00249733571890427
JUND#3727561.408997053038770.004749770540672650.0223259951166709
MAFK#7975222.144662334648410.0007407595719795370.00583484342242785
MAX#4149651.508691036278640.0003732224096266710.0037101632628022
NFE2#4778102.777131678116150.003737307941752490.0186248367671274
SPI1#6688692.036324899597375.5508121718546e-094.42535322455208e-07



Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data

"{{{coexpression_dpi_cluster_scores_median}}}" is not a number.

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