Personal tools

UBERON:0005162

From FANTOM5_SSTAR

Revision as of 17:21, 15 June 2012 by Autoedit (talk | contribs)
Jump to: navigation, search

Name:multi-cell-component structure
Definition:"A structure consisting of multiple cell components but which is not itself a cell and does not have (complete) cells as a part." [CARO:0001000]
Xrefs:
links:

AAO:0011000
CARO:0001000

FBbt:00007060
Subset: upper_level

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000061(anatomical structure)



Children

is a:UBERON:0000122 (neuron projection bundle),UBERON:0011215 (central nervous system cell part cluster)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005162 (multi-cell-component structure), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
3.29e-195FFCP PHASE1:Hg19::chr12:78359873..78359882,+#_e916713bf30b7d22486fdc409344ed40p41@NAV3
3.29e-195FFCP PHASE2:Hg19::chr12:78359873..78359882,+#_e916713bf30b7d22486fdc409344ed40p41@NAV3
4.61e-131FFCP PHASE1:Hg19::chr12:78359680..78359686,+#_53a2658fcdac90ac7c41446f05cbfc9dp32@NAV3
4.61e-131FFCP PHASE2:Hg19::chr12:78359680..78359686,+#_53a2658fcdac90ac7c41446f05cbfc9dp32@NAV3
8.99e-131FFCP PHASE1:Hg19::chr4:645709..645712,+#_669338847644d11df1b17ee01e4cf2ebp15@PDE6B
8.99e-131FFCP PHASE2:Hg19::chr4:645709..645712,+#_669338847644d11df1b17ee01e4cf2ebp15@PDE6B
5.68e-99FFCP PHASE2:Hg19::chrX:103031196..103031205,-#_a4dba5134d6d0f1c53bede352f8690ecp@chrX:103031196..103031205, -
5.68e-99FFCP PHASE1:Hg19::chrX:103031196..103031205,-#_a4dba5134d6d0f1c53bede352f8690ecp@chrX:103031196..103031205, -
5.68e-99FFCP PHASE1:Hg19::chr4:74005833..74005844,-#_a4dba5134d6d0f1c53bede352f8690ecp@chr4:74005833..74005844, -
5.68e-99FFCP PHASE2:Hg19::chr4:74005833..74005844,-#_a4dba5134d6d0f1c53bede352f8690ecp@chr4:74005833..74005844, -
9.38e-99FFCP PHASE1:Hg19::chr3:160203278..160203289,-#_fb6daf5576790bb7d1db07de10000383p8@TRIM59
9.38e-99FFCP PHASE1:Hg19::chr17:36726052..36726061,-#_fb6daf5576790bb7d1db07de10000383p@chr17:36726052..36726061, -
9.38e-99FFCP PHASE2:Hg19::chr3:160203278..160203289,-#_fb6daf5576790bb7d1db07de10000383p8@TRIM59
9.38e-99FFCP PHASE2:Hg19::chr17:36726052..36726061,-#_fb6daf5576790bb7d1db07de10000383p@chr17:36726052..36726061, -
1.55e-98FFCP PHASE1:Hg19::chr5:60927228..60927236,-#_f1e516eb9e10ea975d532c21866a7942p3@BC032909, p3@BC032910
1.55e-98FFCP PHASE1:Hg19::chr14:36462819..36462832,+#_f1e516eb9e10ea975d532c21866a7942p@chr14:36462819..36462832, +
1.55e-98FFCP PHASE2:Hg19::chr17:73689469..73689476,-#_f1e516eb9e10ea975d532c21866a7942p@chr17:73689469..73689476, -
1.55e-98FFCP PHASE2:Hg19::chr5:60927228..60927236,-#_f1e516eb9e10ea975d532c21866a7942p3@BC032909, p3@BC032910
1.55e-98FFCP PHASE2:Hg19::chr15:93827399..93827403,+#_f1e516eb9e10ea975d532c21866a7942p@chr15:93827399..93827403, +
1.55e-98FFCP PHASE1:Hg19::chr7:30202318..30202329,+#_f1e516eb9e10ea975d532c21866a7942p@chr7:30202318..30202329, +
1.55e-98FFCP PHASE1:Hg19::chr15:93827399..93827403,+#_f1e516eb9e10ea975d532c21866a7942p@chr15:93827399..93827403, +
1.55e-98FFCP PHASE2:Hg19::chr14:36462819..36462832,+#_f1e516eb9e10ea975d532c21866a7942p@chr14:36462819..36462832, +
1.55e-98FFCP PHASE2:Hg19::chr12:57628762..57628773,-#_f1e516eb9e10ea975d532c21866a7942p@chr12:57628762..57628773, -
1.55e-98FFCP PHASE1:Hg19::chr17:73689469..73689476,-#_f1e516eb9e10ea975d532c21866a7942p@chr17:73689469..73689476, -
1.55e-98FFCP PHASE2:Hg19::chr7:30202318..30202329,+#_f1e516eb9e10ea975d532c21866a7942p@chr7:30202318..30202329, +
1.55e-98FFCP PHASE1:Hg19::chr12:57628762..57628773,-#_f1e516eb9e10ea975d532c21866a7942p@chr12:57628762..57628773, -
2.56e-98FFCP PHASE1:Hg19::chrX:28605300..28605301,+#_f2fc127f6215b9139ad5c69767ff54bcp8@IL1RAPL1
2.56e-98FFCP PHASE2:Hg19::chr11:117585539..117585541,-#_f2fc127f6215b9139ad5c69767ff54bcp@chr11:117585539..117585541, -
2.56e-98FFCP PHASE1:Hg19::chr11:117585539..117585541,-#_f2fc127f6215b9139ad5c69767ff54bcp@chr11:117585539..117585541, -
2.56e-98FFCP PHASE2:Hg19::chrX:28605300..28605301,+#_f2fc127f6215b9139ad5c69767ff54bcp8@IL1RAPL1
4.22e-98FFCP PHASE2:Hg19::chr12:99288459..99288464,-#_e9cc170b8bcd596739008df26eb8a569p38@ANKS1B
4.22e-98FFCP PHASE1:Hg19::chr12:99288459..99288464,-#_e9cc170b8bcd596739008df26eb8a569p38@ANKS1B
1.05e-79FFCP PHASE2:Hg19::chr14:35514351..35514356,+#_a6e231de0048cc15393c118ed8be3cecp10@FAM177A1
1.05e-79FFCP PHASE2:Hg19::chr7:123673069..123673078,-#_a6e231de0048cc15393c118ed8be3cecp3@TMEM229A
1.05e-79FFCP PHASE1:Hg19::chr14:35514351..35514356,+#_a6e231de0048cc15393c118ed8be3cecp10@FAM177A1
1.05e-79FFCP PHASE1:Hg19::chr7:123673069..123673078,-#_a6e231de0048cc15393c118ed8be3cecp3@TMEM229A
1.56e-79FFCP PHASE1:Hg19::chr1:113638921..113638937,+#_ca81e5411527e8407f2b6c863195a5fbp@chr1:113638921..113638937, +
1.56e-79FFCP PHASE1:Hg19::chr7:149480688..149480699,+#_ca81e5411527e8407f2b6c863195a5fbp@chr7:149480688..149480699, +
1.56e-79FFCP PHASE2:Hg19::chr11:119846488..119846499,+#_ca81e5411527e8407f2b6c863195a5fbp@chr11:119846488..119846499, +
1.56e-79FFCP PHASE1:Hg19::chr11:119846488..119846499,+#_ca81e5411527e8407f2b6c863195a5fbp@chr11:119846488..119846499, +
1.56e-79FFCP PHASE2:Hg19::chr7:149480688..149480699,+#_ca81e5411527e8407f2b6c863195a5fbp@chr7:149480688..149480699, +
1.56e-79FFCP PHASE2:Hg19::chr1:113638921..113638937,+#_ca81e5411527e8407f2b6c863195a5fbp@chr1:113638921..113638937, +
1.56e-79FFCP PHASE2:Hg19::chr10:1246202..1246207,-#_ca81e5411527e8407f2b6c863195a5fbp19@ADARB2
1.56e-79FFCP PHASE1:Hg19::chr10:1246202..1246207,-#_ca81e5411527e8407f2b6c863195a5fbp19@ADARB2
2.34e-79FFCP PHASE2:Hg19::chr5:55069021..55069040,-#_f24da1d8f364c08d239e657046fb7e0dp8@SLC38A9
2.34e-79FFCP PHASE1:Hg19::chr19:1882247..1882274,-#_f24da1d8f364c08d239e657046fb7e0dp5@FAM108A1
2.34e-79FFCP PHASE1:Hg19::chr7:75268487..75268499,-#_f24da1d8f364c08d239e657046fb7e0dp@chr7:75268487..75268499, -
2.34e-79FFCP PHASE1:Hg19::chr5:55069021..55069040,-#_f24da1d8f364c08d239e657046fb7e0dp8@SLC38A9
2.34e-79FFCP PHASE2:Hg19::chr7:75268487..75268499,-#_f24da1d8f364c08d239e657046fb7e0dp@chr7:75268487..75268499, -
2.34e-79FFCP PHASE2:Hg19::chr19:1882247..1882274,-#_f24da1d8f364c08d239e657046fb7e0dp5@FAM108A1
3.49e-79FFCP PHASE2:Hg19::chr10:1246245..1246252,-#_32cbfdc44adc1ce9ececf7ea12b423bdp20@ADARB2
3.49e-79FFCP PHASE1:Hg19::chr10:1246245..1246252,-#_32cbfdc44adc1ce9ececf7ea12b423bdp20@ADARB2
3.49e-79FFCP PHASE2:Hg19::chr22:41636943..41636946,-#_32cbfdc44adc1ce9ececf7ea12b423bdp12@CHADL
3.49e-79FFCP PHASE1:Hg19::chr22:41636943..41636946,-#_32cbfdc44adc1ce9ececf7ea12b423bdp12@CHADL
7.41e-67FFCP PHASE2:Hg19::chr8:22411813..22411825,+#_1759f0dc07785309dae8f3a44762a07bp55@SORBS3
7.41e-67FFCP PHASE1:Hg19::chr8:22411813..22411825,+#_1759f0dc07785309dae8f3a44762a07bp55@SORBS3
1.04e-66FFCP PHASE1:Hg19::chr17:76227461..76227467,+#_18722d41c476553def7f6fe32738b3e8p17@TMEM235
1.04e-66FFCP PHASE2:Hg19::chr17:76227461..76227467,+#_18722d41c476553def7f6fe32738b3e8p17@TMEM235
1.45e-66FFCP PHASE2:Hg19::chr3:135974687..135974698,+#_c7d70daaaf37b2915a286ad9df460d92p5@PCCB
1.45e-66FFCP PHASE2:Hg19::chr17:42992088..42992109,-#_c7d70daaaf37b2915a286ad9df460d92p@chr17:42992088..42992109, -
1.45e-66FFCP PHASE2:Hg19::chr9:92051280..92051285,-#_c7d70daaaf37b2915a286ad9df460d92p13@SEMA4D
1.45e-66FFCP PHASE2:Hg19::chr9:104031973..104031984,+#_c7d70daaaf37b2915a286ad9df460d92p16@LPPR1
1.45e-66FFCP PHASE1:Hg19::chr9:92051280..92051285,-#_c7d70daaaf37b2915a286ad9df460d92p13@SEMA4D
1.45e-66FFCP PHASE2:Hg19::chr2:102413776..102413787,+#_c7d70daaaf37b2915a286ad9df460d92p41@MAP4K4
1.45e-66FFCP PHASE1:Hg19::chr17:42992088..42992109,-#_c7d70daaaf37b2915a286ad9df460d92p@chr17:42992088..42992109, -
1.45e-66FFCP PHASE1:Hg19::chr2:102413776..102413787,+#_c7d70daaaf37b2915a286ad9df460d92p41@MAP4K4
1.45e-66FFCP PHASE1:Hg19::chr3:135974687..135974698,+#_c7d70daaaf37b2915a286ad9df460d92p5@PCCB
1.45e-66FFCP PHASE1:Hg19::chr9:104031973..104031984,+#_c7d70daaaf37b2915a286ad9df460d92p16@LPPR1
2.03e-66FFCP PHASE2:Hg19::chr14:75614593..75614605,-#_54ca4099f8c09102830cb57a837d13dap13@TMED10
2.03e-66FFCP PHASE1:Hg19::chr2:201599836..201599844,-#_54ca4099f8c09102830cb57a837d13dap3@LOC100507140
2.03e-66FFCP PHASE1:Hg19::chr14:75614593..75614605,-#_54ca4099f8c09102830cb57a837d13dap13@TMED10
2.03e-66FFCP PHASE1:Hg19::chr16:81652549..81652560,+#_54ca4099f8c09102830cb57a837d13dap1@AK094104
2.03e-66FFCP PHASE2:Hg19::chr16:81652549..81652560,+#_54ca4099f8c09102830cb57a837d13dap1@AK094104
2.03e-66FFCP PHASE2:Hg19::chr2:201599836..201599844,-#_54ca4099f8c09102830cb57a837d13dap3@LOC100507140
7.73e-66FFCP PHASE2:Hg19::chr5:86418005..86418017,-#_18c123a923e454ad3c321c4cb4a4923bp@chr5:86418005..86418017, -
7.73e-66FFCP PHASE1:Hg19::chr5:86418005..86418017,-#_18c123a923e454ad3c321c4cb4a4923bp@chr5:86418005..86418017, -
1.13e-57FFCP PHASE2:Hg19::chr21:45725770..45725792,+#_07a948c666081ead661db507ab9d7aecp@chr21:45725770..45725792, +
1.13e-57FFCP PHASE1:Hg19::chr10:22892347..22892352,-#_07a948c666081ead661db507ab9d7aecp@chr10:22892347..22892352, -
1.13e-57FFCP PHASE1:Hg19::chr15:79356834..79356842,-#_07a948c666081ead661db507ab9d7aecp15@RASGRF1
1.13e-57FFCP PHASE1:Hg19::chr21:45725770..45725792,+#_07a948c666081ead661db507ab9d7aecp@chr21:45725770..45725792, +
1.13e-57FFCP PHASE1:Hg19::chr9:135089670..135089681,-#_07a948c666081ead661db507ab9d7aecp@chr9:135089670..135089681, -
1.13e-57FFCP PHASE2:Hg19::chr9:135089670..135089681,-#_07a948c666081ead661db507ab9d7aecp@chr9:135089670..135089681, -
1.13e-57FFCP PHASE2:Hg19::chr10:22892347..22892352,-#_07a948c666081ead661db507ab9d7aecp@chr10:22892347..22892352, -
1.13e-57FFCP PHASE2:Hg19::chr15:79356834..79356842,-#_07a948c666081ead661db507ab9d7aecp15@RASGRF1
1.51e-57FFCP PHASE1:Hg19::chr17:76227978..76227989,+#_c25c97011797477e20066a1c14118a56p15@TMEM235
1.51e-57FFCP PHASE2:Hg19::chr17:76227978..76227989,+#_c25c97011797477e20066a1c14118a56p15@TMEM235
2.02e-57FFCP PHASE1:Hg19::chr1:155940355..155940366,-#_1717b46e094f87d95a36e6f7bcc4eda1p43@ARHGEF2
2.02e-57FFCP PHASE1:Hg19::chr12:48166059..48166070,+#_1717b46e094f87d95a36e6f7bcc4eda1p@chr12:48166059..48166070, +
2.02e-57FFCP PHASE2:Hg19::chr22:41636994..41637004,-#_1717b46e094f87d95a36e6f7bcc4eda1p9@CHADL
2.02e-57FFCP PHASE1:Hg19::chr3:183543234..183543241,-#_1717b46e094f87d95a36e6f7bcc4eda1p7@MAP6D1
2.02e-57FFCP PHASE2:Hg19::chr8:26491518..26491523,+#_1717b46e094f87d95a36e6f7bcc4eda1p@chr8:26491518..26491523, +
2.02e-57FFCP PHASE2:Hg19::chr12:48166059..48166070,+#_1717b46e094f87d95a36e6f7bcc4eda1p@chr12:48166059..48166070, +
2.02e-57FFCP PHASE1:Hg19::chr22:41636994..41637004,-#_1717b46e094f87d95a36e6f7bcc4eda1p9@CHADL
2.02e-57FFCP PHASE2:Hg19::chr10:14614090..14614091,-#_1717b46e094f87d95a36e6f7bcc4eda1p22@FAM107B
2.02e-57FFCP PHASE2:Hg19::chr3:183543234..183543241,-#_1717b46e094f87d95a36e6f7bcc4eda1p7@MAP6D1
2.02e-57FFCP PHASE1:Hg19::chr10:14614090..14614091,-#_1717b46e094f87d95a36e6f7bcc4eda1p22@FAM107B
2.02e-57FFCP PHASE2:Hg19::chr1:155940355..155940366,-#_1717b46e094f87d95a36e6f7bcc4eda1p43@ARHGEF2
2.02e-57FFCP PHASE1:Hg19::chr8:26491518..26491523,+#_1717b46e094f87d95a36e6f7bcc4eda1p@chr8:26491518..26491523, +
2.69e-57FFCP PHASE2:Hg19::chr19:31158547..31158552,+#_767f08fd25dde3fe418d5a3e84a88e9ep@chr19:31158547..31158552, +
2.69e-57FFCP PHASE1:Hg19::chr19:31158547..31158552,+#_767f08fd25dde3fe418d5a3e84a88e9ep@chr19:31158547..31158552, +