FFCP PHASE1:Mm9::chr9:56008747..56008775,-
From FANTOM5_SSTAR
Short description: | p2@Tspan3 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tspan3_5end |
Coexpression cluster: | MCL_coexpression_mm9:620 |
Association with transcript: | -20bp_to_ENSMUST00000171927_5end |
EntrezGene: | Tspan3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@Tspan3 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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ectodermal cell | 5.35e-17 | 44 |
neurectodermal cell | 5.35e-17 | 44 |
neural cell | 2.44e-16 | 43 |
neuron | 8.51e-13 | 33 |
neuronal stem cell | 8.51e-13 | 33 |
neuroblast | 8.51e-13 | 33 |
electrically signaling cell | 8.51e-13 | 33 |
electrically responsive cell | 1.04e-10 | 39 |
electrically active cell | 1.04e-10 | 39 |
CNS neuron (sensu Vertebrata) | 1.22e-10 | 23 |
Ontology term | p-value | n |
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central nervous system | 2.23e-36 | 73 |
nervous system | 4.73e-35 | 75 |
structure with developmental contribution from neural crest | 6.92e-33 | 92 |
ectoderm-derived structure | 2.68e-30 | 95 |
ectoderm | 2.68e-30 | 95 |
presumptive ectoderm | 2.68e-30 | 95 |
neurectoderm | 3.33e-30 | 64 |
neural plate | 3.33e-30 | 64 |
presumptive neural plate | 3.33e-30 | 64 |
regional part of nervous system | 5.61e-28 | 54 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.