FFCP PHASE1:Hg19::chrX:140270647..140270745,-
From FANTOM5_SSTAR
Short description: | p3@LDOC1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LDOC1_5end |
Coexpression cluster: | C4853_Renal_aorta_Mesenchymal_pituitary_Smooth_Fibroblast_mesothelioma |
Association with transcript: | -344bp_to_AF086537_5end |
EntrezGene: | LDOC1 |
HGNC: | 6548 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@LDOC1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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mesodermal cell | 9.60e-14 | 121 |
smooth muscle cell | 4.49e-10 | 43 |
smooth muscle myoblast | 4.49e-10 | 43 |
muscle cell | 8.26e-10 | 55 |
muscle precursor cell | 1.57e-09 | 58 |
myoblast | 1.57e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.57e-09 | 58 |
electrically responsive cell | 1.78e-09 | 61 |
electrically active cell | 1.78e-09 | 61 |
vascular associated smooth muscle cell | 6.56e-09 | 32 |
Ontology term | p-value | n |
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epithelium | 8.38e-25 | 306 |
cell layer | 1.88e-24 | 309 |
anatomical conduit | 1.28e-22 | 240 |
tube | 1.56e-19 | 192 |
neural tube | 2.14e-16 | 56 |
neural rod | 2.14e-16 | 56 |
future spinal cord | 2.14e-16 | 56 |
neural keel | 2.14e-16 | 56 |
structure with developmental contribution from neural crest | 4.18e-16 | 132 |
neural plate | 4.50e-16 | 82 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.