NonredundantMotifs:44

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant44
• db :SWISSREGULON
• Id :TP53.p2
• name :TP53
• score :1.0330824947633266
  
• External refs:

EntrezGene:TP53
UniProt:TP53

• Internal refs:

EntrezGene:TP53

Motif matrix

PO A C G T 1 24.833194 49.909662 12.741555 5.420911 2 22.444117 25.789536 34.701953 9.969716 3 18.784722 0 72.238452 1.882148 4 32.427396 0 60.477926 0 5 20.189253 0.88108 66.411359 5.42363 6 0 92.063543 0 0.841779 7 85.656736 2.592464 3.656161 0.999961 8 8.111316 2.657697 12.65702 69.479289 9 0 0.850188 92.055134 0 10 3.889954 60.437433 2.528145 26.04979 11 1.742354 70.705243 7.574414 12.883311 12 1.847559 49.924775 31.043855 10.089133 13 5.242777 2.845862 75.807501 9.009182 14 8.123152 0 72.816085 11.966085 15 25.88775 0 66.104064 0.913508 16 9.196064 65.583922 16.211154 1.914182 17 56.757966 3.967273 4.800638 27.379445 18 16.192636 0 16.667139 60.045547 19 1.887978 9.659654 77.612774 3.744916 20 13.18344 18.179337 4.496092 57.046453