NonredundantMotifs:42

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant42
• db :UNIPROBE
• Id :Sry_primary
• name :SCI09
• score :0.042468679857074566
  
• External refs:

EntrezGene:6736
UniProt:6736

• Internal refs:

EntrezGene:6736

Motif matrix

P0 A C G T 1 0.173553910821485 0.244647010878487 0.248735494710349 0.333063583589678 2 0.317106561976575 0.259459487959638 0.118295437263868 0.305138512799919 3 0.240662422013045 0.181192078172451 0.247535043791699 0.330610456022805 4 0.431219460594741 0.156611422412954 0.14143976187804 0.270729355114265 5 0.95892528072766 0.011289722798393 0.0068819333328407 0.0229030631411059 6 0.049110505356461 0.0110650040306441 0.0128430981214808 0.926981392491414 7 0.0721299121616168 0.0131398227509503 0.00611517503470117 0.908615090052732 8 0.917455623783146 0.00388578046279708 0.0698604904232183 0.00879810533083873 9 0.00879810533083873 0.0698604904232183 0.00388578046279708 0.917455623783146 10 0.908615090052732 0.00611517503470117 0.0131398227509503 0.0721299121616168 11 0.926981392491414 0.0128430981214808 0.0110650040306441 0.049110505356461 12 0.0229030631411059 0.0068819333328407 0.011289722798393 0.95892528072766 13 0.422656110852828 0.136247615558468 0.266000819494699 0.175095454094004 14 0.336160531477187 0.121946469404951 0.177187958109979 0.364705041007882 15 0.247357321323532 0.0971533147963961 0.24892864037951 0.406560723500562 16 0.24636873790792 0.321670331426985 0.222124023554256 0.209836907110839