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NonredundantMotifs:96

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant96
  • db :JASPAR
  • Id :MA0068.1
  • name :Pax4
  • score :0.15303533036622993
  • External refs:
EntrezGene:5078
UniProt:5078

  • Internal refs:
EntrezGene:5078


Motif matrix
P0ACGT
172111
220010
316212
411118
513134
611316
761212
891110
95367
1051114
1161140
127752
138724
146519
1510542
164845
173648
187833
194935
209624
215754
225628
2371103
246915
2531224
267923
2731224
2811136
2961113
3031323

Sub Motif Members